RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PRPS2P11908 318 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 ZNF182P17025 639 aaPredicted RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 PFKLP17858 780 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 CCNA2P20248 432 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 AGXTP21549 392 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 HALP42357 657 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 CBX2Q14781 532 aaPredicted RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 CTU2Q2VPK5 515 aaKnown RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 LRIF1Q5T3J3 769 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 CALHM3Q86XJ0 350 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 ZC3H7AQ8IWR0 971 aaKnown RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 CHDHQ8NE62 594 aaPredicted RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 HDAC2Q92769 488 aaKnown RBP16.49■□□□□ 0.23
ACTB-207ENST00000462494 PYURFQ96I23 114 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 HHIPL1Q96JK4 782 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 CCDC138Q96M89 665 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 P2RY13Q9BPV8 354 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 HERC2P3Q9BVR0 1158 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 USE1Q9NZ43 259 aa16.49■□□□□ 0.23
ACTB-207ENST00000462494 LOC100130705A0A1B0GUX0 176 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 UPK3BL1B0FP48 263 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 UPK3BL2E5RIL1 263 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 NRG2O14511 850 aaPredicted RBP16.48■□□□□ 0.23
ACTB-207ENST00000462494 TEX28O15482 410 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 C8GP07360 202 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 C1SP09871 688 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 GZMMP51124 257 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 PTPN5P54829 565 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
ACTB-207ENST00000462494 C22orf39Q6P5X5 142 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 SERPINA13PQ6UXR4 307 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 DPY19L3Q6ZPD9 716 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 RBM23Q86U06 439 aaKnown RBP16.48■□□□□ 0.23
ACTB-207ENST00000462494 SPARTQ8N0X7 666 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 OR52E4Q8NGH9 312 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 DNAJB8Q8NHS0 232 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 ASB11Q8WXH4 323 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 VOPP1Q96AW1 172 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 CMTM7Q96FZ5 175 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 PRM3Q9NNZ6 103 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 C3orf18Q9UK00 162 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 ORC6Q9Y5N6 252 aa16.48■□□□□ 0.23
ACTB-207ENST00000462494 KCNE1BA0A087WTH5 132 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 A0A1W2PRU2 124 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 PTGES3LE9PB15 166 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 SEC14L2O76054 403 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 RECQL5O94762 991 aaPredicted RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 C1QCP02747 245 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 HLA-FP30511 346 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 IL1RL1Q01638 556 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 CD47Q08722 323 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.236e-7■□□□□ 10
ACTB-207ENST00000462494 NFATC3Q12968 1075 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 SLC14A1Q13336 389 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 MYBPC3Q14896 1274 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 LAPTM4AQ15012 233 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ANKDD1AQ495B1 522 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 MPP7Q5T2T1 576 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 GALNT5Q7Z7M9 940 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 TCAIMQ8N3R3 496 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 CPXM2Q8N436 756 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ARL10Q8N8L6 244 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 CDC26Q8NHZ8 85 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 TBC1D15Q8TC07 691 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 FNDC8Q8TC99 324 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 BBS2Q9BXC9 721 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 DGCR6LQ9BY27 220 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 MAGIXQ9H6Y5 334 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 TMEM9Q9P0T7 183 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 B4GALT6Q9UBX8 382 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 WARS2Q9UGM6 360 aaKnown RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 MAN2B2Q9Y2E5 1009 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 MICAL3Q7RTP6 2002 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ATP1B2P14415 290 aaPredicted RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 JUNBP17275 347 aaPredicted RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 MAPK1P28482 360 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 CDKL4Q5MAI5 379 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 CYP2U1Q7Z449 544 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ZDHHC21Q8IVQ6 265 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 PLPP6Q8IY26 295 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ECHDC3Q96DC8 303 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 REXO5Q96IC2 774 aaKnown RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 TMPRSS11EQ9UL52 423 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 ZNF510Q9Y2H8 683 aa16.47■□□□□ 0.23
ACTB-207ENST00000462494 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
ACTB-207ENST00000462494 LEFTY2O00292 366 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 WNT9AO14904 365 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PRAMEF4O60810 478 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 CYP2A7P20853 494 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 GSTM2P28161 218 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 PTPN6P29350 595 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 SLC6A12P48065 614 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 SPINT3P49223 89 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 HNMTP50135 292 aa16.46■□□□□ 0.23
ACTB-207ENST00000462494 TMBIM6P55061 237 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms