RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 HIF1AQ16665 826 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 KRTAP21-3Q3LHN1 58 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 DNAJC21Q5F1R6 531 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 SPANXN3Q5MJ09 141 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 CASC4Q6P4E1 433 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 PDIK1LQ8N165 341 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 C2CD4AQ8NCU7 369 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 OR8K5Q8NH50 307 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 OR5K2Q8NHB8 316 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 ELMO2Q96JJ3 720 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 NRTNQ99748 197 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 AKIRIN1Q9H9L7 192 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 GPR83Q9NYM4 423 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 MOCS1Q9NZB8 636 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 KLHL42Q9P2K6 505 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 FAM8A1Q9UBU6 413 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 COLEC10Q9Y6Z7 277 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 CSMD1Q96PZ7 3565 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 ANKUB1A6NFN9 424 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 F8W8V4 182 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 H3BMM5 538 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 KIF1CO43896 1103 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 NIPSNAP2O75323 286 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 NDUFS3O75489 264 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CD9P21926 228 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 ELK3P41970 407 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CLCN7P51798 805 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CTBP1Q13363 440 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 WHAMMP3Q1A5X7 153 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 HSP90AA5PQ58FG0 334 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CRB2Q5IJ48 1285 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 PLEKHS1Q5SXH7 462 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 VWA5B1Q5TIE3 1220 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 TRMT10BQ6PF06 316 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 ZDHHC24Q6UX98 284 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 IGFL3Q6UXB1 125 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 ADGRF3Q8IZF5 1079 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CARFQ8N187 725 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 SIDT2Q8NBJ9 832 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 OR52E1Q8NGJ3 308 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 KCNJ9Q92806 393 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 PANX3Q96QZ0 392 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CD180Q99467 661 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 GALPQ9UBC7 116 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
SCAMP4-206ENST00000460767 CENPEQ02224 2701 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 KIF2AO00139 706 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 IFRD1O00458 451 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 NDC80O14777 642 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 MATN4O95460 622 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 F7P08709 466 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 FOLR1P15328 257 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 RRADP55042 308 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 ARL4CP56559 192 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 TRADDQ15628 312 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 BBS9Q3SYG4 887 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 CRYBG3Q68DQ2 2970 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 FAM199XQ6PEV8 388 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 KLHL35Q6PF15 583 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 KIAA0408Q6ZU52 694 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 D2HGDHQ8N465 521 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 OR5AR1Q8NGP9 310 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 CALML6Q8TD86 181 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 C19orf60Q96EN9 201 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 RNF31Q96EP0 1072 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 CERS2Q96G23 380 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 SLC30A3Q99726 388 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 TRIM31Q9BZY9 425 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 FGF21Q9NSA1 209 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 ASF1BQ9NVP2 202 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 POMT2Q9UKY4 750 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 ICKQ9UPZ9 632 aa13.17□□□□□ -0.3
SCAMP4-206ENST00000460767 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms