RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 HTR6P50406 440 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 UFM1P61960 85 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 RPL38P63173 70 aaKnown RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 RPA4Q13156 261 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 PWP1Q13610 501 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 E2F2Q14209 437 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 AGERQ15109 404 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 FBXO48Q5FWF7 155 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 C9orf64Q5T6V5 341 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 TMC5Q6UXY8 1006 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 ERN2Q76MJ5 926 aaKnown RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 C12orf40Q86WS4 652 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 TICAM1Q8IUC6 712 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 KIAA2013Q8IYS2 634 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 FLCNQ8NFG4 579 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 HM13Q8TCT9 377 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 SLC13A3Q8WWT9 602 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 SCAMP4Q969E2 229 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 ESAMQ96AP7 390 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 TMEM125Q96AQ2 219 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 TESCQ96BS2 214 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 RSPRY1Q96DX4 576 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 CDK15Q96Q40 435 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 KCTD14Q9BQ13 255 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 C1orf50Q9BV19 199 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 DPY30Q9C005 99 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 DPEP2Q9H4A9 486 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 BRF2Q9HAW0 419 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 THAP10Q9P2Z0 257 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 LIMD1Q9UGP4 676 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
ERCC3-205ENST00000460485 DNMT3AQ9Y6K1 912 aaPredicted RBP13.73□□□□□ -0.21
ERCC3-205ENST00000460485 KCNE1BA0A087WTH5 132 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CLGNO14967 610 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 TSPAN6O43657 245 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 GMNNO75496 209 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 ADH1BP00325 375 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 G6PDP11413 515 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 ARSAP15289 507 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CD1EP15812 388 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 SDHBP21912 280 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 VIPR2P41587 438 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 GRIA2P42262 883 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CASP2P42575 452 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 C21orf58P58505 322 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 LRRC74AQ0VAA2 488 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 ZNF234Q14588 700 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 PTCHD3Q3KNS1 767 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 FRG2Q64ET8 278 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 GRHL2Q6ISB3 625 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 ANO7Q6IWH7 933 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 UNC5DQ6UXZ4 953 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 ADAMTSL4Q6UY14 1074 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 KBTBD2Q8IY47 623 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CXorf40AQ8TE69 158 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 SELENOMQ8WWX9 145 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 SORCS1Q8WY21 1168 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 FCRL1Q96LA6 429 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CCDC115Q96NT0 180 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 LRRC3BQ96PB8 259 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 FRG2BQ96QU4 278 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CLMPQ9H6B4 373 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 CCM2LQ9NUG4 571 aaPredicted RBP13.72□□□□□ -0.21
ERCC3-205ENST00000460485 GIMAP2Q9UG22 337 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 RNF11Q9Y3C5 154 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 PCDHB3Q9Y5E6 796 aa13.72□□□□□ -0.21
ERCC3-205ENST00000460485 FRYLO94915 3013 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 DHRS12A0PJE2 317 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 PRRT4C9JH25 899 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 H0YIV9 168 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 H3BM21 787 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 RNASEH1O60930 286 aaKnown RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 SEC22BO75396 215 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 ERN1O75460 977 aaKnown RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 RPN2P04844 631 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 APODP05090 189 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 ASGR2P07307 311 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 FCARP24071 287 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 GPR1P46091 355 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 CLDN8P56748 225 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 ABRQ12979 859 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 RUNX3Q13761 415 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 C18orf21Q32NC0 220 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 LRRC73Q5JTD7 316 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 ZC3H14Q6PJT7 736 aaKnown RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 GET4Q7L5D6 327 aaPredicted RBP13.71□□□□□ -0.21
ERCC3-205ENST00000460485 LPCAT2Q7L5N7 544 aa13.71□□□□□ -0.21
ERCC3-205ENST00000460485 DET1Q7L5Y6 550 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms