RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CCDC115Q96NT0 180 aa19.08■□□□□ 0.65
CNEP1R1-203ENST00000458059 ELOVL6Q9H5J4 265 aa19.08■□□□□ 0.65
CNEP1R1-203ENST00000458059 ATP13A3Q9H7F0 1226 aa19.08■□□□□ 0.65
CNEP1R1-203ENST00000458059 MARCH5Q9NX47 278 aa19.08■□□□□ 0.65
CNEP1R1-203ENST00000458059 LHX3Q9UBR4 397 aa19.08■□□□□ 0.65
CNEP1R1-203ENST00000458059 ILVBLA1L0T0 632 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 STK16O75716 305 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 COL6A1P12109 1028 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 CSKP41240 450 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 SLC13A2Q13183 592 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 NFATC2Q13469 925 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 USP39Q53GS9 565 aaKnown RBP19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 CATSPEREQ5SY80 951 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 CPZQ66K79 652 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 SLC22A12Q96S37 553 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 HMG20AQ9NP66 347 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 SERHLQ9NQF3 203 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 PCDH10Q9P2E7 1040 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 VPS51Q9UID3 782 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 PCDHGA10Q9Y5H3 936 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 PMF1-BGLAPU3KQ54 211 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 CASP8AP2Q9UKL3 1982 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 GAPDHSO14556 408 aaPredicted RBP19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 CD6P30203 668 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 HMGCLP35914 325 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 TMED10P49755 219 aaKnown RBP19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 SEPHS1P49903 392 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 VLDLRP98155 873 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 ZNF846Q147U1 533 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 BCL7CQ8WUZ0 217 aaPredicted RBP19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 ELMO1Q92556 727 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 HTRA1Q92743 480 aa19.08■□□□□ 0.64
CNEP1R1-203ENST00000458059 PLXNA4Q9HCM2 1894 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 ZNF840PA6NDX5 716 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 AGRPO00253 132 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 SYN3O14994 580 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 KDM1AO60341 852 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 NTRK1P04629 796 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 DGKAP23743 735 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 PRKCZQ05513 592 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 BOP1Q14137 746 aaKnown RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 NCCRP1Q6ZVX7 275 aaPredicted RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 APCDD1Q8J025 514 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 STK40Q8N2I9 435 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 PIK3C3Q8NEB9 887 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 ZIC5Q96T25 663 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 ABCB10Q9NRK6 738 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 CD84Q9UIB8 345 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 SAMHD1Q9Y3Z3 626 aaKnown RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 OARD1Q9Y530 152 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 PLXNA3P51805 1871 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 SLC28A1O00337 649 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 RPIAP49247 311 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 SFSWAPQ12872 951 aaKnown RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 PDE12Q6L8Q7 609 aaKnown RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 P2RY8Q86VZ1 359 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 HORMAD1Q86X24 394 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 CLECL1Q8IZS7 167 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 CADM3Q8N126 398 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 CPPED1Q9BRF8 314 aaPredicted RBP19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 ITM2CQ9NQX7 267 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 ZNF229Q9UJW7 825 aa19.07■□□□□ 0.64
CNEP1R1-203ENST00000458059 OR6C75A6NL08 312 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 SOBPA7XYQ1 873 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 KPNA4O00629 521 aaPredicted RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 SEPT4O43236 478 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 PRKAR2AP13861 404 aaKnown RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 TNFRSF1BP20333 461 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 CDH18Q13634 790 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 GBX1Q14549 363 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ZXDCQ2QGD7 858 aaPredicted RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ADGRF1Q5T601 910 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 GPR153Q6NV75 609 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ANGPTL8Q6UXH0 198 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 RBFAQ8N0V3 343 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 TMEM132CQ8N3T6 1108 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 CNDP2Q96KP4 475 aaKnown RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 M0R129 80 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 WDR47O94967 919 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 VIPP01282 170 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 NUDT7P0C024 238 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 BPIP17213 487 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ITGALP20701 1170 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 HNF1BP35680 557 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 DGKEP52429 567 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 GPR162Q16538 588 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 TRIM71Q2Q1W2 868 aaKnown RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 CYP27C1Q4G0S4 372 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 SOWAHCQ53LP3 525 aaPredicted RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ANKRD13BQ86YJ7 626 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 CHPFQ8IZ52 775 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 TTC29Q8NA56 475 aaPredicted RBP19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 MAL2Q969L2 176 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 ABHD8Q96I13 439 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 PANX1Q96RD7 426 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 SH3GL1Q99961 368 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 HEPHQ9BQS7 1158 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 KLHL25Q9H0H3 589 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 SIRT5Q9NXA8 310 aa19.06■□□□□ 0.64
CNEP1R1-203ENST00000458059 CLDN9O95484 217 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms