RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IRF3Q14653 427 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CAMK4Q16566 473 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 HYAL4Q2M3T9 481 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MOGAT2Q3SYC2 334 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CRY2Q49AN0 593 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 HIKESHIQ53FT3 197 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CATSPEREQ5SY80 951 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MARCH8Q5T0T0 291 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 HES5Q5TA89 166 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CARD17Q5XLA6 110 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SNRNP48Q6IEG0 339 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 PRMT9Q6P2P2 845 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 IDO2Q6ZQW0 420 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 LRRC8DQ7L1W4 858 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KANSL1Q7Z3B3 1105 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KCTD20Q7Z5Y7 419 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 TRIM69Q86WT6 500 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MISPQ8IVT2 679 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KATNAL2Q8IYT4 538 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 DSELQ8IZU8 1212 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 BCL6BQ8N143 479 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 FSTL5Q8N475 847 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 OR52E1Q8NGJ3 308 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 EXD1Q8NHP7 514 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 IL31RAQ8NI17 732 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NFKBIDQ8NI38 313 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NDNFQ8TB73 568 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 HCAR2Q8TDS4 363 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SLC22A17Q8WUG5 538 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CKAP2Q8WWK9 683 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PYDC1Q8WXC3 89 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KAT2AQ92830 837 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 APBB2Q92870 758 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CCDC127Q96BQ5 260 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ARHGEF26Q96DR7 871 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ZNF514Q96K75 400 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 MSLNLQ96KJ4 702 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 ZNF317Q96PQ6 595 aaPredicted RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 KLHL5Q96PQ7 755 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PSD2Q9BQI7 771 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PAPOLGQ9BWT3 736 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 NLNQ9BYT8 704 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 WDR11Q9BZH6 1224 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 YIPF3Q9GZM5 350 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 RAB17Q9H0T7 212 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 NAPBQ9H115 298 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 OR52A5Q9H2C5 316 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 CATSPERBQ9H7T0 1116 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 KAT14Q9H8E8 782 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 UNKLQ9H9P5 680 aaKnown RBP5.29□□□□□ -1.56
VPS41-209ENST00000457055 SERHLQ9NQF3 203 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 DIABLOQ9NR28 239 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SLC2A4RGQ9NR83 387 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PNPLA3Q9NST1 481 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MTMR4Q9NYA4 1195 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MGAT4CQ9UBM8 478 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 IL20RAQ9UHF4 553 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 SLC24A2Q9UI40 661 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 FBXW2Q9UKT8 454 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 CA14Q9ULX7 337 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 VWA7Q9Y334 891 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 PLEKHM1Q9Y4G2 1056 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 MAB21L2Q9Y586 359 aa5.29□□□□□ -1.56
VPS41-209ENST00000457055 LY75O60449 1722 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 UBE4BO95155 1302 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TAF1LQ8IZX4 1826 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CICQ96RK0 1608 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 A0A0U1RQS6 177 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 A8MX80 341 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TMEM114B3SHH9 223 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 H3BUI4 141 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 H7C1Q1 480 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 LGALS8O00214 317 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 NR5A2O00482 541 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SLC30A4O14863 429 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 BET1O15155 118 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF185O15231 689 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZSCAN12O43309 604 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 LPXNO60711 386 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 NOS1APO75052 506 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 AKAP3O75969 853 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 DHFRP00374 187 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 GNAI2P04899 355 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ANXA5P08758 320 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MCF2P10911 925 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 GFAPP14136 432 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 IL1R1P14778 569 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MSR1P21757 451 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CCNOP22674 350 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 GIFP27352 417 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 LCN1P31025 176 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ATP5C1P36542 298 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 FEN1P39748 380 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 MTNR1BP49286 362 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CARSP49589 748 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 GNG10P50151 68 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CCR4P51679 360 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PNLIPRP1P54315 467 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms