RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SLC39A7Q92504 469 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 CDKL2Q92772 493 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 LRFN5Q96NI6 719 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 GPR87Q9BY21 358 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 TWSG1Q9GZX9 223 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 ACTR5Q9H9F9 607 aaPredicted RBP22.34■■□□□ 1.17
CBX3-204ENST00000456948 UTP6Q9NYH9 597 aaKnown RBP22.34■■□□□ 1.17
CBX3-204ENST00000456948 CROTQ9UKG9 612 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 PLCL2Q9UPR0 1127 aa22.34■■□□□ 1.17
CBX3-204ENST00000456948 TARM1B6A8C7 271 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 MYO1CO00159 1063 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 KATNA1O75449 491 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 OR2B3O76000 313 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 AGXTP21549 392 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 CUL1Q13616 776 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 KIAA1614Q5VZ46 1190 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 C8orf74Q6P047 294 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 TLDC1Q6P9B6 456 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 SLC26A11Q86WA9 606 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 MYO1HQ8N1T3 1032 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 GPATCH11Q8N954 259 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 OR1L3Q8NH93 324 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 FLVCR1-AS1Q8TAF5 88 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 MCOLN3Q8TDD5 553 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 ASB11Q8WXH4 323 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 SMPDL3AQ92484 453 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 MR1Q95460 341 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 NDNQ99608 321 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 DPH2Q9BQC3 489 aaPredicted RBP22.33■■□□□ 1.17
CBX3-204ENST00000456948 SAYSD1Q9NPB0 183 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 TXNDC16Q9P2K2 825 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 VWA7Q9Y334 891 aa22.33■■□□□ 1.17
CBX3-204ENST00000456948 ARHGEF33A8MVX0 844 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 TIAF1O95411 115 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 SYF2O95926 243 aaKnown RBP22.32■■□□□ 1.16
CBX3-204ENST00000456948 C8GP07360 202 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 MCM3P25205 808 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 CMPK1P30085 196 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 RPA3P35244 121 aaPredicted RBP22.32■■□□□ 1.16
CBX3-204ENST00000456948 PLTPP55058 493 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 CRTC2Q53ET0 693 aaPredicted RBP22.32■■□□□ 1.16
CBX3-204ENST00000456948 FAM45BPQ6NSW5 357 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 UBE2R2Q712K3 238 aaPredicted RBP22.32■■□□□ 1.16
CBX3-204ENST00000456948 CPNE9Q8IYJ1 553 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 LMNTD1Q8N9Z9 388 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 FAM45AQ8TCE6 357 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 STARD8Q92502 1023 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 SLC30A3Q99726 388 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 C17orf62Q9BQA9 187 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 SLC12A9Q9BXP2 914 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 PHACTR1Q9C0D0 580 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 MED16Q9Y2X0 877 aa22.32■■□□□ 1.16
CBX3-204ENST00000456948 GFYI3L273 518 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 TP73O15350 636 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 CCNDBP1O95273 360 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 PRB1P04280 392 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 F7P08709 466 aaPredicted RBP22.31■■□□□ 1.16
CBX3-204ENST00000456948 GSTA2P09210 222 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 HIST1H2AGP0C0S8 130 aaPredicted RBP22.31■■□□□ 1.16
CBX3-204ENST00000456948 SFTPCP11686 197 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 HIST1H2ADP20671 130 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 MAGP20916 626 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 GABRB3P28472 473 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 PEBP1P30086 187 aaKnown RBP22.31■■□□□ 1.16
CBX3-204ENST00000456948 IL2P60568 153 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 DNASE1L3Q13609 305 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 CCSMST1Q4G0I0 132 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 TRMT10BQ6PF06 316 aaKnown RBP22.31■■□□□ 1.16
CBX3-204ENST00000456948 FIGLAQ6QHK4 219 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 CEP128Q6ZU80 1094 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 GIMAP7Q8NHV1 300 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 HIST1H2AHQ96KK5 128 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 HIST1H2AJQ99878 128 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 H2AFJQ9BTM1 129 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 FAM60AQ9NP50 221 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 MOCS1Q9NZB8 636 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 SRPK3Q9UPE1 567 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 MGAQ8IWI9 3026 aa22.31■■□□□ 1.16
CBX3-204ENST00000456948 PCM1Q15154 2024 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 MEN1O00255 615 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 SLC16A5O15375 505 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 ZNF749O43361 778 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 RECKO95980 971 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 PNLIPRP1P54315 467 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 TSTA3Q13630 321 aaPredicted RBP22.3■■□□□ 1.16
CBX3-204ENST00000456948 TCTE1Q5JU00 501 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 HECTD2Q5U5R9 776 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 CYHR1Q6ZMK1 362 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 STRA8Q7Z7C7 330 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 SYTL1Q8IYJ3 562 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 DNAJC22Q8N4W6 341 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 KIF18AQ8NI77 898 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 VPS39Q96JC1 886 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 NDC1Q9BTX1 674 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 TRIM54Q9BYV2 358 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 PCDHGA6Q9Y5G7 932 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 SPTBP11277 2137 aa22.3■■□□□ 1.16
CBX3-204ENST00000456948 SEC16AO15027 2179 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 CD63P08962 238 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 WT1P19544 449 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms