RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TAPT1Q6NXT6 567 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 SUSD1Q6UWL2 747 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GOLGA7Q7Z5G4 137 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CCDC190Q86UF4 302 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 P3H2Q8IVL5 708 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 SIMC1Q8NDZ2 872 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PPTC7Q8NI37 304 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF675Q8TD23 568 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 MED30Q96HR3 178 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 ZBTB18Q99592 522 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GDF15Q99988 308 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 INPP5KQ9BT40 448 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 DPY30Q9C005 99 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CLPBQ9H078 707 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GABARAPL1Q9H0R8 117 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RANGRFQ9HD47 186 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 IL1RAPQ9NPH3 570 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TAS2R16Q9NYV7 291 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 VPS4AQ9UN37 437 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CCL27Q9Y4X3 112 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PCDHGA6Q9Y5G7 932 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PEX16Q9Y5Y5 336 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 A3GALT2U3KPV4 340 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TRBV5-3A0A0A0MS03 114 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 A0A0X1KG70 313 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 ARHGAP33O14559 1287 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PTHP01270 115 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 DDOSTP39656 456 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CACNB2Q08289 660 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 NPRL3Q12980 569 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 DDR2Q16832 855 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RGMBQ6NW40 437 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CALHM3Q86XJ0 350 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PIANPQ8IYJ0 282 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 BRSK1Q8TDC3 778 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 JPH3Q8WXH2 748 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RNF170Q96K19 258 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 KCNC2Q96PR1 638 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TRNT1Q96Q11 434 aaKnown RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PAAF1Q9BRP4 392 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TTPALQ9BTX7 342 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 MMP28Q9H239 520 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GIMAP4Q9NUV9 329 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TMLHEQ9NVH6 421 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GPR83Q9NYM4 423 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CCDC59Q9P031 241 aaKnown RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RBPJLQ9UBG7 517 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RAPGEFL1Q9UHV5 662 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 MUTYHQ9UIF7 546 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 SAMHD1Q9Y3Z3 626 aaKnown RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 LYVE1Q9Y5Y7 322 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 PAPPA2Q9BXP8 1791 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 MEIOCA2RUB1 952 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 FAM220BPB1ANY3 271 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 NDUFS3O75489 264 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 SNX4O95219 450 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 STSP08842 583 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 DNAJA1P31689 397 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CDKN2CP42773 168 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ARMCX4Q5H9R4 360 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 VN1R5Q7Z5H4 357 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 C11orf74Q86VG3 221 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PLPP6Q8IY26 295 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 KBTBD8Q8NFY9 601 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 OR4K2Q8NGD2 314 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GGHQ92820 318 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 SH3GL1Q99961 368 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PRRG3Q9BZD7 231 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CSNK1G1Q9HCP0 422 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 RPRD1BQ9NQG5 326 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CRNNQ9UBG3 495 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PSORS1C1Q9UIG5 152 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 MOSPD1Q9UJG1 213 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GABRQQ9UN88 632 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF451Q9Y4E5 1061 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ACTL7AQ9Y615 435 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GOLGA8CPA6NN73 597 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GPR39O43194 453 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 KIAA0513O60268 411 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GUCA1CO95843 209 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 CYP2A7P20853 494 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 AZGP1P25311 298 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GDF5P43026 501 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 RGS6P49758 472 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 LIMK1P53667 647 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 MLLT6P55198 1093 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 IL2P60568 153 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ELP6Q0PNE2 266 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GTF2H2Q13888 395 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 TBCEQ15813 527 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 BAK1Q16611 211 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
CLIP4-208ENST00000456385 YIF1BQ5BJH7 314 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 ATG9BQ674R7 924 aa10.05□□□□□ -0.8
CLIP4-208ENST00000456385 GTF2H2CQ6P1K8 395 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms