RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LCN10Q6JVE6 187 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 TAX1BP1Q86VP1 789 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 RAB43Q86YS6 212 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ZNF655Q8N720 491 aaPredicted RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 LMNTD1Q8N9Z9 388 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ADAMTS17Q8TE56 1095 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 FAM167BQ9BTA0 163 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 NAT9Q9BTE0 207 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 SPRTNQ9H040 489 aaPredicted RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 ACSS2Q9NR19 701 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ENAMQ9NRM1 1142 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 ASIC3Q9UHC3 531 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 PCYOX1Q9UHG3 505 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 GPN3Q9UHW5 284 aaPredicted RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 TLK1Q9UKI8 766 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 G3BP2Q9UN86 482 aaKnown RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 TP53TG5Q9Y2B4 290 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 PCDHGA9Q9Y5G4 932 aaKnown RBP17.18■□□□□ 0.34
MSH6-207ENST00000456246 KLK4Q9Y5K2 254 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
MSH6-207ENST00000456246 BSNQ9UPA5 3926 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 ZNF839A8K0R7 811 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 PRICKLE3O43900 615 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 TTC4O95801 387 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 ENO3P13929 434 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 PGAM1P18669 254 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 HSD17B2P37059 387 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 RRADP55042 308 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 KCNC4Q03721 635 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 PTK6Q13882 451 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 CYP2A13Q16696 494 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 FIGLAQ6QHK4 219 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 SYDE1Q6ZW31 735 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 MCATQ8IVS2 390 aaKnown RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 C2orf73Q8N5S3 287 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 TMEM102Q8N9M5 508 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
MSH6-207ENST00000456246 SIGLEC10Q96LC7 697 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 ING2Q9H160 280 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 CLMPQ9H6B4 373 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 C20orf96Q9NUD7 363 aaPredicted RBP17.17■□□□□ 0.34
MSH6-207ENST00000456246 NDOR1Q9UHB4 597 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 CIDEBQ9UHD4 219 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 FAM169AQ9Y6X4 670 aa17.17■□□□□ 0.34
MSH6-207ENST00000456246 DNALI1O14645 258 aaPredicted RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 ZNF185O15231 689 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 HCRTR1O43613 425 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 SRPX2O60687 465 aaPredicted RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 PSIP1O75475 530 aaKnown RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 IGHEP01854 428 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 ERGP11308 486 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 PIM1P11309 404 aaPredicted RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 CLCN7P51798 805 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 TLE1Q04724 770 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 GRM7Q14831 915 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 KLHL38Q2WGJ6 581 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 ASB18Q6ZVZ8 466 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 MED25Q71SY5 747 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 OR9A1PQ8NGU1 263 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 TRIM56Q9BRZ2 755 aaKnown RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 DDX47Q9H0S4 455 aaKnown RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 IFT80Q9P2H3 777 aaPredicted RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 RUVBL2Q9Y230 463 aaKnown RBP17.16■□□□□ 0.34
MSH6-207ENST00000456246 PCDHGB7Q9Y5F8 929 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 FER1L5A0AVI2 2057 aa17.16■□□□□ 0.34
MSH6-207ENST00000456246 TENM4Q6N022 2769 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 A0A1B0GX78 115 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 ARGFXA6NJG6 315 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 MYO1CO00159 1063 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SMAPO00193 183 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 EIF3FO00303 357 aaPredicted RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 MPC1LP0DKB6 136 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 CBSLP0DN79 551 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 CMPK1P30085 196 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 CBSP35520 551 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FOLR3P41439 243 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 GRIA3P42263 894 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SLC1A2P43004 574 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 PTGIRP43119 386 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 CTBP1Q13363 440 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SSPNQ14714 243 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 NKAIN1Q4KMZ8 207 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 ACSBG2Q5FVE4 666 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 C1orf189Q5VU69 101 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 MLIPQ5VWP3 458 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FCRL6Q6DN72 434 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 LRRC8EQ6NSJ5 796 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 HPS6Q86YV9 775 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 DENND6AQ8IWF6 608 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FAM20CQ8IXL6 584 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 TTC29Q8NA56 475 aaPredicted RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 TEX19Q8NA77 164 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FBXO15Q8NCQ5 510 aaPredicted RBP17.15■□□□□ 0.34
MSH6-207ENST00000456246 OR2L3Q8NG85 312 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 SMPDL3AQ92484 453 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FKBP10Q96AY3 582 aa17.15■□□□□ 0.34
MSH6-207ENST00000456246 FAM136AQ96C01 138 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms