RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PPIL1Q9Y3C6 166 aa3.61□□□□□ -1.83
RBM39-220ENST00000455343 PCYT1BQ9Y5K3 369 aaPredicted RBP3.61□□□□□ -1.83
RBM39-220ENST00000455343 KLF2Q9Y5W3 355 aaPredicted RBP3.61□□□□□ -1.83
RBM39-220ENST00000455343 KIR2DS5A0A0G2JLQ3 304 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 A0A0G2JNG1 304 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 A0A1W2PQ67 120 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 C2CD4BA6NLJ0 364 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 OR5K4A6NMS3 321 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 A8MX80 341 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 B5MCH6 92 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PRSS44E7EML9 344 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 J3KR12 359 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 KIR2DS3K7RE56 304 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 E2F3O00716 465 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 KIF1CO43896 1103 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 PRAMEF4O60810 478 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PRAMEF11O60813 436 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 ZG16O60844 167 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TMEM63AO94886 807 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CAPN1P07384 714 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PLEKP08567 350 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 RAB40ALP0C0E4 278 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CLEC2LP0C7M8 214 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 F3P13726 295 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TYRP1P17643 537 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 XRCC1P18887 633 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 SERPINA4P29622 427 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 HNRNPH3P31942 346 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 KRT9P35527 623 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PTPN9P43378 593 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SCNN1BP51168 640 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CLCNKAP51800 687 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 HDAC4P56524 1084 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PER3P56645 1201 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SOX8P57073 446 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 IL2P60568 153 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 RPS15P62841 145 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 NHLH2Q02577 135 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 BCL2L1Q07817 233 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 NFATC2Q13469 925 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TRIM25Q14258 630 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 ZNF235Q14590 738 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 KIR2DS5Q14953 304 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 ACOX1Q15067 660 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 C15orf59Q2T9L4 293 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 CCDC14Q49A88 953 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CCDC40Q4G0X9 1142 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 C2CD6Q53TS8 623 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 C19orf54Q5BKX5 351 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CFAP58Q5T655 872 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 FAM102AQ5T9C2 384 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 VWA5B1Q5TIE3 1220 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PWWP2BQ6NUJ5 590 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 RWDD4Q6NW29 188 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 TTI2Q6NXR4 508 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TMEM26Q6ZUK4 368 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 FRMD7Q6ZUT3 714 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 Q6ZVL8 140 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 MED25Q71SY5 747 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 STRADAQ7RTN6 431 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SLC9B2Q86UD5 537 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 KCNMB4Q86W47 210 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 RASGRP3Q8IV61 690 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 RAVER1Q8IY67 606 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 ZBTB2Q8N680 514 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CCDC185Q8N715 623 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 EMC1Q8N766 993 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 AVL9Q8NBF6 648 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SLC38A9Q8NBW4 561 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TMEM35BQ8NCS4 154 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 OR2W6PQ8NHA6 318 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 NTN5Q8WTR8 489 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 RNF31Q96EP0 1072 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SCRN2Q96FV2 425 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 DHTKD1Q96HY7 919 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 SLC41A2Q96JW4 573 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 LRFN5Q96NI6 719 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PSKH2Q96QS6 385 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 MCCC1Q96RQ3 725 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 NCAPGQ9BPX3 1015 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 HERPUD2Q9BSE4 406 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SYNCQ9H7C4 482 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SUDS3Q9H7L9 328 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 PLCB1Q9NQ66 1216 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 FANCLQ9NW38 375 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 RMND1Q9NWS8 449 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 SYBUQ9NX95 663 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 GPR83Q9NYM4 423 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 VPS18Q9P253 973 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 PTGFRNQ9P2B2 879 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 CPNE7Q9UBL6 633 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 UBA2Q9UBT2 640 aaPredicted RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 LNPEPQ9UIQ6 1025 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 TMEM98Q9Y2Y6 226 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 COPG1Q9Y678 874 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 NAV3Q8IVL0 2385 aa3.6□□□□□ -1.83
RBM39-220ENST00000455343 ANKHD1Q8IWZ3 2542 aaKnown RBP3.6□□□□□ -1.83
RBM39-220ENST00000455343 A0A1B0GUH1 482 aa3.59□□□□□ -1.83
RBM39-220ENST00000455343 NPIPB15A6NHN6 443 aaPredicted RBP3.59□□□□□ -1.83
RBM39-220ENST00000455343 MARCH11A6NNE9 402 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms