RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RGS9BPQ6ZS82 235 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 GOLGA7Q7Z5G4 137 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SLC22A9Q8IVM8 553 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 DCUN1D3Q8IWE4 304 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SFRP1Q8N474 314 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 LRRC8CQ8TDW0 803 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 TRPC4APQ8TEL6 797 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 ZNF483Q8TF39 744 aaPredicted RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 HIST1H2AHQ96KK5 128 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 CCDC138Q96M89 665 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 CDK15Q96Q40 435 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 HIST1H2AJQ99878 128 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 C1QTNF3Q9BXJ4 246 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 EPN3Q9H201 632 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 TRIT1Q9H3H1 467 aaKnown RBP10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SLC40A1Q9NP59 571 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 RXFP3Q9NSD7 469 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 FGFR1OP2Q9NVK5 253 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 PNPOQ9NVS9 261 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 WWOXQ9NZC7 414 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 MID2Q9UJV3 735 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SLC6A14Q9UN76 642 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SLC22A14Q9Y267 594 aa10.65□□□□□ -0.71
SCN9A-205ENST00000454569 SPTBP11277 2137 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 EP300Q09472 2414 aaPredicted RBP10.64□□□□□ -0.71
SCN9A-205ENST00000454569 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 TMEM233B4DJY2 109 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 KLF11O14901 512 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 ERGP11308 486 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 MPSTP25325 297 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 PSMB5P28074 263 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 EPHA8P29322 1005 aaPredicted RBP10.64□□□□□ -0.71
SCN9A-205ENST00000454569 PEBP1P30086 187 aaKnown RBP10.64□□□□□ -0.71
SCN9A-205ENST00000454569 HALP42357 657 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 PNLIPRP1P54315 467 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 FOXA1P55317 472 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 AP1S2P56377 157 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 SH3BP2P78314 561 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 CLCQ05315 142 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 RCN2Q14257 317 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 GPR18Q14330 331 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 ANKS6Q68DC2 871 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 OGFOD3Q6PK18 319 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 FRMD7Q6ZUT3 714 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 C17orf82Q86X59 251 aaPredicted RBP10.64□□□□□ -0.71
SCN9A-205ENST00000454569 ARL14Q8N4G2 192 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 TEX9Q8N6V9 391 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 ZNF781Q8N8C0 355 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 OR52B6Q8NGF0 335 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 OR56A3Q8NH54 315 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 PPP1R14CQ8TAE6 165 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 AGR3Q8TD06 166 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 UBTD2Q8WUN7 234 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 RAD51AP1Q96B01 352 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 SKA1Q96BD8 255 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 KCNA7Q96RP8 456 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 TRIM54Q9BYV2 358 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 DRC3Q9H069 523 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 SPHK1Q9NYA1 384 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 CPNE7Q9UBL6 633 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 ZDHHC2Q9UIJ5 367 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 GMEB2Q9UKD1 530 aa10.64□□□□□ -0.71
SCN9A-205ENST00000454569 BTN3A3O00478 584 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 TRIM38O00635 465 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 EDF1O60869 148 aaKnown RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 STK16O75716 305 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 WDR47O94967 919 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 S100BP04271 92 aaPredicted RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 ANXA6P08133 673 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 NPPBP16860 134 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 ENGP17813 658 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 DRD4P21917 467 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 TBPL1P62380 186 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 TSTA3Q13630 321 aaPredicted RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 GTF2H2Q13888 395 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 SF3A2Q15428 464 aaKnown RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 CYP2A13Q16696 494 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 GTF2H2CQ6P1K8 395 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 SYVN1Q86TM6 617 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 THOC6Q86W42 341 aaKnown RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 GKN2Q86XP6 184 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 SYTL1Q8IYJ3 562 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 KYQ8NBH2 561 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 GPR156Q8NFN8 814 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 OR4E2Q8NGC2 313 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 CEP76Q8TAP6 659 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 BCAS4Q8TDM0 211 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 CXorf40BQ96DE9 158 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 CCDC126Q96EE4 140 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 MED8Q96G25 268 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 SPSB2Q99619 263 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 GTPBP2Q9BX10 602 aaKnown RBP10.63□□□□□ -0.71
SCN9A-205ENST00000454569 TBC1D10AQ9BXI6 508 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 SLC32A1Q9H598 525 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 KIR3DX1Q9H7L2 352 aa10.63□□□□□ -0.71
SCN9A-205ENST00000454569 MVB12BQ9H7P6 319 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms