RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SLC5A10A0PJK1 596 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RCCD1A6NED2 376 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C5orf60A6NFR6 353 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HACD1B0YJ81 288 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C19orf84I3L1E1 186 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DSCR3O14972 297 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 JRKO75564 520 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IPO13O94829 963 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 UNC5CO95185 931 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZRANB2O95218 330 aaKnown RBP eCLIP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 METTL18O95568 372 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EIF2S1P05198 315 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HBQ1P09105 142 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EDN3P14138 238 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACPPP15309 386 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CTNNA2P26232 953 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VARSP26640 1264 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MST1P26927 711 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCR7P32248 378 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FOXN2P32314 431 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HADHAP40939 763 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GRIA1P42261 906 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SLC1A1P43005 524 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TSFMP43897 325 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CARSP49589 748 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PER3P56645 1201 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ARG2P78540 354 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CACNG1Q06432 222 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KLC1Q07866 573 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HSPA14Q0VDF9 509 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TSTA3Q13630 321 aaPredicted RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GRB7Q14451 532 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SYT16Q17RD7 645 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SLC5A12Q1EHB4 618 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VWA2Q5GFL6 755 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IRAK1BP1Q5VVH5 260 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FCRLBQ6BAA4 426 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FCRL6Q6DN72 434 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C11orf63Q6NUN7 778 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CNSTQ6PJW8 725 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GFRALQ6UXV0 394 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C3P1Q6ZMU1 363 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NEK10Q6ZWH5 1172 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NLRP9Q7RTR0 991 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LAPTM4BQ86VI4 370 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MCATQ8IVS2 390 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VSTM4Q8IW00 320 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR4N4Q8N0Y3 316 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR52K1Q8NGK4 314 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR13J1Q8NGT2 312 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR5K2Q8NHB8 316 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SKA2Q8WVK7 121 aaPredicted RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FKBP10Q96AY3 582 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LURAP1Q96LR2 239 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C10orf90Q96M02 699 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNF778Q96MU6 729 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IP6K3Q96PC2 410 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VAT1Q99536 393 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MIPEPQ99797 713 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C17orf62Q9BQA9 187 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACAT2Q9BWD1 397 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HES7Q9BYE0 225 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RBCK1Q9BYM8 510 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TRIM8Q9BZR9 551 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LHPPQ9H008 270 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EPS8L2Q9H6S3 715 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SYTL2Q9HCH5 934 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NLE1Q9NVX2 485 aaPredicted RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNHIT6Q9NWK9 470 aaKnown RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LCMT1Q9UIC8 334 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TINAGQ9UJW2 476 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C3orf18Q9UK00 162 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TRHDEQ9UKU6 1024 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NFS1Q9Y697 457 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NCOA6Q14686 2063 aaPredicted RBP5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HEATR5BQ9P2D3 2071 aa5.73□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANKHD1Q8IWZ3 2542 aaKnown RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IGHV3-20A0A0C4DH32 117 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C17orf113A0A1B0GUU1 675 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR2W5A6NFC9 320 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MAP2K7O14733 419 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LIN7AO14910 233 aaPredicted RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PCDH17O14917 1159 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 P2RX6O15547 441 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MAN1A2O60476 641 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 STK10O94804 968 aaKnown RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AP2A1O95782 977 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GOT2P00505 430 aaKnown RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FTH1P02794 183 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 STSP08842 583 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ITGAMP11215 1152 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PYGMP11217 842 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 COX6A1P12074 109 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FBLP22087 321 aaKnown RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CTNNA1P35221 906 aaKnown RBP5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SOX11P35716 441 aa5.72□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CD151P48509 253 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms