RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 KIAA1191Q96A73 305 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 SCYL1Q96KG9 808 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 TGM7Q96PF1 710 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 MRPL57Q9BQC6 102 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 RAB11FIP5Q9BXF6 653 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 TWSG1Q9GZX9 223 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 SEMA6CQ9H3T2 930 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 INTS9Q9NV88 658 aaKnown RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 OR6C2Q9NZP2 312 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 STOX2Q9P2F5 926 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 KLHL3Q9UH77 587 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
VPS33A-202ENST00000451053 MN1Q10571 1320 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-202ENST00000451053 IGHV5-10-1A0A0J9YXX1 117 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 A0A1W2PPV9 198 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PIPSLA2A3N6 862 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 KIF1CO43896 1103 aaKnown RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PLIN3O60664 434 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 GUCA1CO95843 209 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 C9P02748 559 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CHN1P15882 459 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PNLIPRP1P54315 467 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PRKAA1Q13131 559 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CLPPQ16740 277 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ANKS6Q68DC2 871 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ARMC6Q6NXE6 501 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 TMEM71Q6P5X7 295 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 FRA10AC1Q70Z53 315 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 RAB44Q7Z6P3 723 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 MARCH9Q86YJ5 346 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 GPSM1Q86YR5 675 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PLXDC1Q8IUK5 500 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 SLITRK4Q8IW52 837 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 LRRC56Q8IYG6 542 aaPredicted RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CHCHD4Q8N4Q1 142 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 RAB42Q8N4Z0 105 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 FLVCR1-AS1Q8TAF5 88 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 RHEBL1Q8TAI7 183 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 EXT2Q93063 718 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 HIST1H2AHQ96KK5 128 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CCDC74BQ96LY2 380 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 CCDC138Q96M89 665 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 FAM111AQ96PZ2 611 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ATOH8Q96SQ7 321 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 HIST1H2AJQ99878 128 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 H2AFJQ9BTM1 129 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 TRIM54Q9BYV2 358 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 RAB33BQ9H082 229 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 MRPL46Q9H2W6 279 aaKnown RBP12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ARL15Q9NXU5 204 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 ACTR10Q9NZ32 417 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 EPHA6Q9UF33 1036 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 LNPEPQ9UIQ6 1025 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 POMT2Q9UKY4 750 aa12.6□□□□□ -0.39
VPS33A-202ENST00000451053 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 NCF1BA6NI72 391 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 SYCE1LA8MT33 242 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 NCF1CA8MVU1 366 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 E7ENX8 843 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 KERAO60938 352 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 CSO75390 466 aaKnown RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 PROCP04070 461 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 THRAP10827 490 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 NCF1P14598 390 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 UGT2B7P16662 529 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TAC1P20366 129 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 PSMB5P28074 263 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 LSSP48449 732 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 AP1S2P56377 157 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 CDKL1Q00532 357 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TAP2Q03519 686 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TSTA3Q13630 321 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 MPP2Q14168 576 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ARHGAP19Q14CB8 494 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TGFBIQ15582 683 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 ZXDCQ2QGD7 858 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 C18orf21Q32NC0 220 aaPredicted RBP12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TECRLQ5HYJ1 363 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 AGTRAPQ6RW13 159 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 SUSD1Q6UWL2 747 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 TRIM73Q86UV7 250 aa12.59□□□□□ -0.39
VPS33A-202ENST00000451053 SYTL1Q8IYJ3 562 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms