RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF675Q8TD23 568 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RASGRP4Q8TDF6 673 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC7A6Q92536 515 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MRPS31Q92665 395 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 KCNJ9Q92806 393 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PMM1Q92871 262 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC35C1Q96A29 364 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TRIM43Q96BQ3 446 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 INTS12Q96CB8 462 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 MAP6Q96JE9 813 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYRFLQ96LU7 910 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SPATA13Q96N96 652 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DCLRE1CQ96SD1 692 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CGRRF1Q99675 332 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SEPT5Q99719 369 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 EGFL8Q99944 293 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 YIPF4Q9BSR8 244 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TOR3AQ9H497 397 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NANOGQ9H9S0 305 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MRM3Q9HC36 420 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ATP13A1Q9HD20 1204 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MID1IP1Q9NPA3 183 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZFP57Q9NU63 452 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYEF2Q9P2K5 600 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 TBC1D24Q9ULP9 559 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NIP7Q9Y221 180 aaKnown RBP eCLIP2.16□□□□□ -2.06
USP53-202ENST00000450251 FARSAQ9Y285 508 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ADAM18Q9Y3Q7 739 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DAGLAQ9Y4D2 1042 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PCDHGB5Q9Y5G0 923 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PCDHA1Q9Y5I3 950 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 MYH13Q9UKX3 1938 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 LRRC37A3O60309 1634 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ELOA3CA0A087WX78 387 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM95CA0A1B0GW59 222 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 WDR27A2RRH5 827 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SMCO3A2RU48 225 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM159BA6NKW6 160 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TTLL8A6PVC2 850 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KCNU1A8MYU2 1149 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TOR1BO14657 336 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SUV39H1O43463 412 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SSX4O60224 188 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMEM127O75204 238 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DFFBO76075 338 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CDK14O94921 469 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PNPP00491 289 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ALDH2P05091 517 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 C2P06681 752 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FAM163BP0C2L3 166 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NELFEP18615 380 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 GRK5P34947 590 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RFC2P35250 354 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CDH8P55286 799 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 YWHAZP63104 245 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 DLK1P80370 383 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RBP5P82980 135 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 C2orf80Q0P641 193 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PTPN20Q4JDL3 420 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 YIF1BQ5BJH7 314 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 FBXO48Q5FWF7 155 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TATDN1Q6P1N9 297 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 BRAT1Q6PJG6 821 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 SERPINA13PQ6UXR4 307 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ETV3LQ6ZN32 361 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF600Q6ZNG1 722 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GAREM2Q75VX8 874 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CIR1Q86X95 450 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 IZUMO1Q8IYV9 350 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CDK20Q8IZL9 346 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PARP16Q8N5Y8 322 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 NIPA2Q8N8Q9 360 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 DNAAF1Q8NEP3 725 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 GPR156Q8NFN8 814 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 OR52L1Q8NGH7 329 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ACTL9Q8TC94 416 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ZNF566Q969W8 418 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMBIM1Q969X1 311 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ISL2Q96A47 359 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RRNAD1Q96FB5 475 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 MYO19Q96H55 970 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 KLHL5Q96PQ7 755 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 RHOJQ9H4E5 214 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CCDC86Q9H6F5 360 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 CARS2Q9HA77 564 aaKnown RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 SLC28A3Q9HAS3 691 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ARHGEF4Q9NR80 690 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 CHRAC1Q9NRG0 131 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMEM184CQ9NVA4 438 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TMLHEQ9NVH6 421 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TAS2R13Q9NYV9 303 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 TAS2R8Q9NYW2 309 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 PDP1Q9P0J1 537 aaPredicted RBP2.16□□□□□ -2.06
USP53-202ENST00000450251 ASH2LQ9UBL3 628 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 POU2F3Q9UKI9 436 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 USP18Q9UMW8 372 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 U3KQV3 271 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ANKRD36CQ5JPF3 1778 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 A0A0B4J203 849 aa2.16□□□□□ -2.06
USP53-202ENST00000450251 ISM1B1AKI9 464 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms