RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 LOC102723996A0A087X1L8 192 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 ENO4A6NNW6 628 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 AVILO75366 819 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 VPREB1P12018 145 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 AZU1P20160 251 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 RBMS1P29558 406 aaKnown RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 MMP12P39900 470 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 HUNKP57058 714 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 MAP2K1Q02750 393 aaPredicted RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 CREB5Q02930 508 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 ZNF415Q09FC8 603 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 COX10Q12887 443 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 CALCOCO2Q13137 446 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 PCLAFQ15004 111 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 E2F5Q15329 346 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 CA9Q16790 459 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 WLSQ5T9L3 541 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 RSRC2Q7L4I2 434 aaKnown RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 TMPRSS11BQ86T26 416 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 CDC20BQ86Y33 519 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 NIPA2Q8N8Q9 360 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 OR1L3Q8NH93 324 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 SMAP2Q8WU79 429 aaPredicted RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 EVI5LQ96CN4 794 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 USP28Q96RU2 1077 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 GPATCH1Q9BRR8 931 aaKnown RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 KIFC3Q9BVG8 833 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 OSGEPL1Q9H4B0 414 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 TBC1D17Q9HA65 648 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 SPHK1Q9NYA1 384 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 NUDT4Q9NZJ9 180 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 STK26Q9P289 416 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 ZNF215Q9UL58 517 aaPredicted RBP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 TRIM17Q9Y577 477 aa3.29□□□□□ -1.88
AC009961.3-201ENST00000449832 CUX2O14529 1486 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SCAPERQ9BY12 1400 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 ITIH6Q6UXX5 1313 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 GPR75-ASB3A0A0A6YYF3 556 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 GLRA3O75311 464 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 CDK2AP2O75956 126 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 DANCRP0C864 163 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SMIM18P0DKX4 95 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 HOXD13P35453 343 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SLC9A3P48764 834 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 PSMC6P62333 389 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 RAPSNQ13702 412 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SYT14P1Q58G82 188 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 IGSF11Q5DX21 431 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SZRD1Q7Z422 152 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 NUDT13Q86X67 352 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 GUF1Q8N442 669 aaKnown RBP3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 POC5Q8NA72 575 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 VANGL1Q8TAA9 524 aaPredicted RBP3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 ZNF519Q8TB69 540 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 FAM120BQ96EK7 910 aaKnown RBP3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 ZNF486Q96H40 463 aaPredicted RBP3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 DGCR6LQ9BY27 220 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 GHITMQ9H3K2 345 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 SYNCQ9H7C4 482 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 PRR34Q9NV39 138 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 PSD3Q9NYI0 1048 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 MOB4Q9Y3A3 225 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 PTRH2Q9Y3E5 179 aaKnown RBP3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 ABCC9O60706 1549 aa3.28□□□□□ -1.88
AC009961.3-201ENST00000449832 RSF1Q96T23 1441 aaPredicted RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 RAD50Q92878 1312 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 BAZ1AQ9NRL2 1556 aaPredicted RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 A0A1W2PR80 420 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 FSD2A1L4K1 749 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 A6NCN8 305 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 IDH3BO43837 385 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 TSPAN1O60635 241 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 MAGEC1O60732 1142 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 GJB3O75712 270 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 SEC24AO95486 1093 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 BCL10O95999 233 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 CAPN2P17655 700 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 PTPN3P26045 913 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 MC1RQ01726 317 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 LMOD3Q0VAK6 560 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 RIGQ13278 110 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 ZKSCAN8Q15776 578 aaPredicted RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 ELFN2Q5R3F8 820 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 CASC1Q6TDU7 716 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 ZNF595Q8IYB9 648 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 FAM9BQ8IZU0 186 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 NME8Q8N427 588 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 Q8NBF4 154 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 GATAD1Q8WUU5 269 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 CCDC107Q8WV48 283 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 PRICKLE1Q96MT3 831 aaPredicted RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 NECTIN4Q96NY8 510 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 TSPAN18Q96SJ8 248 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 URM1Q9BTM9 101 aaKnown RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 CCDC94Q9BW85 323 aaPredicted RBP3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 TERF2IPQ9NYB0 399 aa3.27□□□□□ -1.89
AC009961.3-201ENST00000449832 OR6C2Q9NZP2 312 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms