RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 VPS13CQ709C8 3753 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 TLN2Q9Y4G6 2542 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 NRDCO43847 1150 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 ATE1O95260 518 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 TPOP07202 933 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 ZGLP1P0C6A0 271 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 CCNCP24863 283 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 PTGS2P35354 604 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 NKX6-1P78426 367 aaPredicted RBP11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 MAMLD1Q13495 774 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 PPP2R5EQ16537 467 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 CCDC122Q5T0U0 273 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 GPRC6AQ5T6X5 926 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 YOD1Q5VVQ6 348 aaPredicted RBP11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 NEK10Q6ZWH5 1172 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 FGD2Q7Z6J4 655 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 MCOLN2Q8IZK6 566 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 FAM98AQ8NCA5 519 aaKnown RBP11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 FAM57AQ8TBR7 257 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 DTX3LQ8TDB6 740 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 TRIB3Q96RU7 358 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 DNAJC7Q99615 494 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 RIC8BQ9NVN3 520 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 ZNHIT6Q9NWK9 470 aaKnown RBP11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 MAU2Q9Y6X3 613 aa11.99□□□□□ -0.49
AC004540.1-204ENST00000449537 IGHV1-45A0A0A0MS14 117 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 A0A0J9YY10 115 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 A8MUI8 341 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 IFRD1O00458 451 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 AURKAO14965 403 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 CD46P15529 392 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 AKT1P31749 480 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 PRKCIP41743 596 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 EMP2P54851 167 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 DLX5P56178 289 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 EEF1A2Q05639 463 aaKnown RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 TBX2Q13207 712 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 PRKG2Q13237 762 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 GRM7Q14831 915 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 IFI16Q16666 785 aaKnown RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 FAM214AQ32MH5 1076 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 ACAD10Q6JQN1 1059 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 CCDC70Q6NSX1 233 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 LAPTM4BQ86VI4 370 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 LILRA3Q8N6C8 439 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 METTL27Q8N6F8 245 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 SIMC1Q8NDZ2 872 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 OR8K1Q8NGG5 319 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 HSPH1Q92598 858 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 FATE1Q969F0 183 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 COX4I2Q96KJ9 171 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 TSGA13Q96PP4 275 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 ZNF282Q9UDV7 671 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 HRH3Q9Y5N1 445 aa11.98□□□□□ -0.49
AC004540.1-204ENST00000449537 A0A1W2PQ72 361 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 EPHB6O15197 1021 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 ARHGEF9O43307 516 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 HMGCLP35914 325 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 KIR2DL3P43628 341 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 KLK7P49862 253 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 GALNT2Q10471 571 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 PMPCAQ10713 525 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 KDELC1Q6UW63 502 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 FAM151BQ6UXP7 276 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 UNC5AQ6ZN44 842 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 DAAM2Q86T65 1068 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 NT5DC3Q86UY8 548 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 MDS2Q8NDY4 140 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 LINC00615Q96LM1 132 aaPredicted RBP11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 SIGLEC12Q96PQ1 595 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 PANX2Q96RD6 677 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 HES7Q9BYE0 225 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 ZNF304Q9HCX3 659 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 ABHD10Q9NUJ1 306 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 SPHK1Q9NYA1 384 aa11.97□□□□□ -0.49
AC004540.1-204ENST00000449537 LRRC53A6NM62 1247 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 H7C1Q1 480 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 RASGRF2O14827 1237 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 GPR39O43194 453 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 WIPF1O43516 503 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 CHRM5P08912 532 aaPredicted RBP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 MCM3P25205 808 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 IL1R2P27930 398 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 CD96P40200 585 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TUBA3CQ13748 450 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms