RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 RASGEF1AQ8N9B8 481 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 DDHD1Q8NEL9 900 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 OR2L2Q8NH16 312 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 SUN3Q8TAQ9 357 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 LCN9Q8WX39 176 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 DLG3Q92796 817 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 N4BP2L2Q92802 583 aaPredicted RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 LINC00615Q96LM1 132 aaPredicted RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 C12orf66Q96MD2 445 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 GPR137Q96N19 417 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 CSPG4P5Q96PW8 444 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 DMRTA2Q96SC8 542 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 ZNF559Q9BR84 538 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 CCM2Q9BSQ5 444 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 SPRTNQ9H040 489 aaPredicted RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 SRMSQ9H3Y6 488 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 PARVAQ9NVD7 372 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 RBM22Q9NW64 420 aaKnown RBP eCLIP7.01□□□□□ -1.293e-25■■■■■ 57.8
RBM39-218ENST00000449489 COQ3Q9NZJ6 369 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 IL1RAPL1Q9NZN1 696 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 DHCR7Q9UBM7 475 aaKnown RBP7.01□□□□□ -1.29
RBM39-218ENST00000449489 ST6GALNAC2Q9UJ37 374 aa7.01□□□□□ -1.29
RBM39-218ENST00000449489 LOC100289279A0A1B0GTE1 492 aa7□□□□□ -1.29
RBM39-218ENST00000449489 TMEM191CA6NGB0 347 aa7□□□□□ -1.29
RBM39-218ENST00000449489 KIAA1324LA8MWY0 1029 aaPredicted RBP7□□□□□ -1.29
RBM39-218ENST00000449489 BTN3A3O00478 584 aa7□□□□□ -1.29
RBM39-218ENST00000449489 BTN3A1O00481 513 aa7□□□□□ -1.29
RBM39-218ENST00000449489 ADAM10O14672 748 aa7□□□□□ -1.29
RBM39-218ENST00000449489 DDX3YO15523 660 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 ALOX12BO75342 701 aa7□□□□□ -1.29
RBM39-218ENST00000449489 BMP10O95393 424 aa7□□□□□ -1.29
RBM39-218ENST00000449489 PRAMEF1O95521 474 aa7□□□□□ -1.29
RBM39-218ENST00000449489 SERPINA7P05543 415 aa7□□□□□ -1.29
RBM39-218ENST00000449489 MMP2P08253 660 aa7□□□□□ -1.29
RBM39-218ENST00000449489 HOXD4P09016 255 aaPredicted RBP7□□□□□ -1.29
RBM39-218ENST00000449489 SLC35G4P0C7Q5 338 aa7□□□□□ -1.29
RBM39-218ENST00000449489 PRR35P0CG20 571 aa7□□□□□ -1.29
RBM39-218ENST00000449489 HMGCLP35914 325 aa7□□□□□ -1.29
RBM39-218ENST00000449489 CTSCP53634 463 aa7□□□□□ -1.29
RBM39-218ENST00000449489 FOXL2P58012 376 aa7□□□□□ -1.29
RBM39-218ENST00000449489 AP2B1P63010 937 aa7□□□□□ -1.29
RBM39-218ENST00000449489 YBX1P67809 324 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 GALNT2Q10471 571 aa7□□□□□ -1.29
RBM39-218ENST00000449489 RBBP7Q16576 425 aa7□□□□□ -1.29
RBM39-218ENST00000449489 IFI16Q16666 785 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 ATP13A4Q4VNC1 1196 aa7□□□□□ -1.29
RBM39-218ENST00000449489 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
RBM39-218ENST00000449489 ATG9BQ674R7 924 aa7□□□□□ -1.29
RBM39-218ENST00000449489 ACAD10Q6JQN1 1059 aa7□□□□□ -1.29
RBM39-218ENST00000449489 TMEM220Q6QAJ8 160 aa7□□□□□ -1.29
RBM39-218ENST00000449489 SPESP1Q6UW49 350 aa7□□□□□ -1.29
RBM39-218ENST00000449489 TMEM200AQ86VY9 491 aa7□□□□□ -1.29
RBM39-218ENST00000449489 TMEM151BQ8IW70 566 aa7□□□□□ -1.29
RBM39-218ENST00000449489 C19orf47Q8N9M1 422 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 DNAAF3Q8N9W5 541 aa7□□□□□ -1.29
RBM39-218ENST00000449489 LILRB4Q8NHJ6 448 aa7□□□□□ -1.29
RBM39-218ENST00000449489 CCDC110Q8TBZ0 833 aa7□□□□□ -1.29
RBM39-218ENST00000449489 STK35Q8TDR2 534 aa7□□□□□ -1.29
RBM39-218ENST00000449489 ASB5Q8WWX0 329 aa7□□□□□ -1.29
RBM39-218ENST00000449489 GAL3ST3Q96A11 431 aa7□□□□□ -1.29
RBM39-218ENST00000449489 C18orf12Q96KH6 178 aa7□□□□□ -1.29
RBM39-218ENST00000449489 TRIB3Q96RU7 358 aa7□□□□□ -1.29
RBM39-218ENST00000449489 GPR63Q9BZJ6 419 aa7□□□□□ -1.29
RBM39-218ENST00000449489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7□□□□□ -1.29
RBM39-218ENST00000449489 WWP1Q9H0M0 922 aa7□□□□□ -1.29
RBM39-218ENST00000449489 GANQ9H2C0 597 aa7□□□□□ -1.29
RBM39-218ENST00000449489 FAM60AQ9NP50 221 aa7□□□□□ -1.29
RBM39-218ENST00000449489 SEPT11Q9NVA2 429 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 STMN3Q9NZ72 180 aa7□□□□□ -1.29
RBM39-218ENST00000449489 UBP1Q9NZI7 540 aa7□□□□□ -1.29
RBM39-218ENST00000449489 ZNF711Q9Y462 761 aa7□□□□□ -1.29
RBM39-218ENST00000449489 CFAP20Q9Y6A4 193 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 PHF3Q92576 2039 aaKnown RBP7□□□□□ -1.29
RBM39-218ENST00000449489 A0A1B0GX78 115 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 ASPDHA6ND91 283 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 OR5H15A6NDH6 313 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 BIN1O00499 593 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 CTAG2O75638 210 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 STK10O94804 968 aaKnown RBP6.99□□□□□ -1.29
RBM39-218ENST00000449489 WDPCPO95876 746 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 HEXAP06865 529 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 C8BP07358 591 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 DNASE1P24855 282 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 CD151P48509 253 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 MEOX1P50221 254 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 KRT33BQ14525 404 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 SLC9A5Q14940 896 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 SYCP1Q15431 976 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 SLC14A2Q15849 920 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 CAMK4Q16566 473 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 LONRF2Q1L5Z9 754 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 SARM1Q6SZW1 724 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 LINC00114Q6XXX2 140 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 NDUFAF7Q7L592 441 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 AMIGO1Q86WK6 493 aa6.99□□□□□ -1.29
RBM39-218ENST00000449489 DOLPP1Q86YN1 238 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms