RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BAZ1AQ9NRL2 1556 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 PDS5BQ9NTI5 1447 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM30AQ9NV96 361 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 TBC1D7Q9P0N9 293 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 CGNQ9P2M7 1197 aaKnown RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 MTUS1Q9ULD2 1270 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 RNF150Q9ULK6 438 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 RRP15Q9Y3B9 282 aaKnown RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM184BQ9Y519 407 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 IKBKGQ9Y6K9 419 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 CLCA3PQ9Y6N3 262 aa4.25□□□□□ -1.73
HMGB1P48-201ENST00000446155 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 MAGEA13PA6NCF6 341 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 C5orf51A6NDU8 294 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 HEPACAM2A8MVW5 462 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 FAM90A26D6RGX4 464 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC16A5O15375 505 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPINT2O43291 252 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 AP5Z1O43299 807 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 XRCC3O43542 346 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 FCGR3BO75015 233 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 CRCPO75575 148 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 TPM2P07951 284 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 C8orf89P0DMQ9 161 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 LBPP18428 481 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 CD22P20273 847 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SERPINB6P35237 376 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 GMPSP49915 693 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 UCP2P55851 309 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 TAS2R38P59533 333 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 GMFBP60983 142 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 POLR2LP62875 67 aaKnown RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 FOXM1Q08050 763 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SF3B4Q15427 424 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 IFI44LQ53G44 452 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 DCST1Q5T197 706 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 RGMBQ6NW40 437 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 GFRALQ6UXV0 394 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 TOM1L2Q6ZVM7 507 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 PPP1R42Q7Z4L9 355 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 EXOC3L1Q86VI1 746 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 PAPD5Q8NDF8 572 aaKnown RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 ACVR1CQ8NER5 493 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR2AJ1Q8NGZ0 328 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 LMO3Q8TAP4 145 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCDC110Q8TBZ0 833 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 ZNF606Q8WXB4 792 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 RIT1Q92963 219 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 ABTB1Q969K4 478 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 FAM84BQ96KN1 310 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRMT6Q96LA8 375 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPATA33Q96N06 139 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SFXN2Q96NB2 322 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR6C1Q96RD1 312 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 KCNK16Q96T55 309 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 TEX13BQ9BXU2 312 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 P2RY12Q9H244 342 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 SYTL2Q9HCH5 934 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 POLE3Q9NRF9 147 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 PNPLA3Q9NST1 481 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 DCAF16Q9NXF7 216 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 STRAPQ9Y3F4 350 aaKnown RBP4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 ATAD2BQ9ULI0 1458 aa4.24□□□□□ -1.73
HMGB1P48-201ENST00000446155 PDS5AQ29RF7 1337 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SMARCA2P51531 1590 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 NOTCH4Q99466 2003 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SYNJ2BP-COX16A0A087WUM0 186 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 A0A1W2PP11 408 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ELOVL7A1L3X0 281 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM221A6NGB7 291 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 TMEM189-UBE2V1I3L0A0 370 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 J3QR06 171 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 MEIS2O14770 477 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ACSL3O95573 720 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 OR2T7P0C7T2 308 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCDC192P0DO97 292 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPP1P10451 314 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ETS1P14921 441 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ARF4P18085 180 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 CORO1AP31146 461 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 CCKBRP32239 447 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 ACAA2P42765 397 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 KCNJ10P78508 379 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRKCZQ05513 592 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SLC20A2Q08357 652 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 UBE2V1Q13404 147 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 GAMTQ14353 236 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SYT16Q17RD7 645 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 FAM174BQ3ZCQ3 159 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 TCTE1Q5JU00 501 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 SPOUT1Q5T280 376 aaKnown RBP4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRAMEF8Q5VWM4 474 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 C18orf63Q68DL7 685 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PRR27Q6MZM9 219 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 KIAA1161Q6NSJ0 714 aa4.23□□□□□ -1.73
HMGB1P48-201ENST00000446155 PODNL1Q6PEZ8 512 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms