RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 FCRL6Q6DN72 434 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 SYTL1Q8IYJ3 562 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 RAB42Q8N4Z0 105 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 OR9A1PQ8NGU1 263 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 KCNJ9Q92806 393 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 INPP5DQ92835 1189 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 SNF8Q96H20 258 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 LRFN5Q96NI6 719 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 NDNQ99608 321 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 WDR83Q9BRX9 315 aaKnown RBP14.2□□□□□ -0.14
USE1-202ENST00000445667 NAT9Q9BTE0 207 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 AARSD1Q9BTE6 412 aaKnown RBP14.2□□□□□ -0.14
USE1-202ENST00000445667 GPR87Q9BY21 358 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 CHRNA10Q9GZZ6 450 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 IRAK4Q9NWZ3 460 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 GEMIN8Q9NWZ8 242 aaKnown RBP14.2□□□□□ -0.14
USE1-202ENST00000445667 SLC17A6Q9P2U8 582 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 PLCL2Q9UPR0 1127 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 SNX24Q9Y343 169 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 KALRNO60229 2985 aa14.2□□□□□ -0.14
USE1-202ENST00000445667 A0A1W2PPV9 198 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 TP73O15350 636 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 AHSGP02765 367 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CAPN1P07384 714 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CBSLP0DN79 551 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CBSP35520 551 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 RPL21P46778 160 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 ETF1P62495 437 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 TIAL1Q01085 375 aaKnown RBP eCLIP14.19□□□□□ -0.14
USE1-202ENST00000445667 HIF1AQ16665 826 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 TTLL9Q3SXZ7 439 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 C1orf189Q5VU69 101 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 SYT10Q6XYQ8 523 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CYHR1Q6ZMK1 362 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 ANKMY2Q8IV38 441 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 MCATQ8IVS2 390 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 ZNF655Q8N720 491 aaPredicted RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 ENDOVQ8N8Q3 282 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 OR2A1Q8NGT9 310 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 HMGCLL1Q8TB92 370 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CD200R1Q8TD46 325 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 CERS2Q96G23 380 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 PKP4Q99569 1192 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 MIPEPQ99797 713 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 EURLQ9NYK6 297 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 SPATA7Q9P0W8 599 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 KLHL42Q9P2K6 505 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 ZC3H7BQ9UGR2 993 aaKnown RBP14.19□□□□□ -0.14
USE1-202ENST00000445667 COMMD10Q9Y6G5 202 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 TEX264Q9Y6I9 313 aa14.19□□□□□ -0.14
USE1-202ENST00000445667 SPTBP11277 2137 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 ATRXP46100 2492 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 B8ZZF3 427 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 SMAPO00193 183 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 VPS26AO75436 327 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 CATP04040 527 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 HBQ1P09105 142 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 MPC1LP0DKB6 136 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 MCM3P25205 808 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 ARL4CP56559 192 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 NFKB2Q00653 900 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 KCNAB2Q13303 367 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 CYP2A13Q16696 494 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 RBM20Q5T481 1227 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 TEDDM1Q5T9Z0 273 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 ZNF385CQ66K41 422 aaPredicted RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 TRMT10BQ6PF06 316 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 SUSD1Q6UWL2 747 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 NEK10Q6ZWH5 1172 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 ZNF605Q86T29 641 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 CPNE9Q8IYJ1 553 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 SPATA4Q8NEY3 305 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 APOBEC4Q8WW27 367 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 ASB11Q8WXH4 323 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 ACAT2Q9BWD1 397 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 NLNQ9BYT8 704 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 STARD5Q9NSY2 213 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 INTS7Q9NVH2 962 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 DHCR7Q9UBM7 475 aaKnown RBP14.18□□□□□ -0.14
USE1-202ENST00000445667 POLHQ9Y253 713 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 KCNMB2Q9Y691 235 aa14.18□□□□□ -0.14
USE1-202ENST00000445667 GFYI3L273 518 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 MYO1CO00159 1063 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 ZSCAN9O15535 394 aaPredicted RBP14.17□□□□□ -0.14
USE1-202ENST00000445667 NRP2O60462 931 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 SYF2O95926 243 aaKnown RBP14.17□□□□□ -0.14
USE1-202ENST00000445667 RECKO95980 971 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 RAB40ALP0C0E4 278 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 SFTPCP11686 197 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 AGXTP21549 392 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 PGGT1BP53609 377 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 CDKN2DP55273 166 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 C2orf54Q08AI8 447 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 PDIA2Q13087 525 aaKnown RBP14.17□□□□□ -0.14
USE1-202ENST00000445667 TSTA3Q13630 321 aaPredicted RBP14.17□□□□□ -0.14
USE1-202ENST00000445667 IL10RAQ13651 578 aa14.17□□□□□ -0.14
USE1-202ENST00000445667 FASTKD3Q14CZ7 662 aaKnown RBP14.17□□□□□ -0.14
USE1-202ENST00000445667 STEAP4Q687X5 459 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms