RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 KRT80Q6KB66 452 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 TRMT11Q7Z4G4 463 aaKnown RBP16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 EPHX4Q8IUS5 362 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 C10orf111Q8N326 155 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 OSCP1Q8WVF1 389 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 CYGBQ8WWM9 190 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 RDH14Q9HBH5 336 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 CFAP20Q9Y6A4 193 aaKnown RBP16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 DYTNA2CJ06 578 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 SLC9A3R1O14745 358 aaPredicted RBP16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 FGF19O95750 216 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 C8GP07360 202 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 CBSLP0DN79 551 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZNF23P17027 643 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 CBSP35520 551 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 LAPTM5Q13571 262 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 COL9A2Q14055 689 aaPredicted RBP16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 LCN8Q6JVE9 175 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 NPAS3Q8IXF0 933 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 SYTL1Q8IYJ3 562 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 TRPS1Q9UHF7 1281 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 PLAGL1Q9UM63 463 aa16.35■□□□□ 0.21
LAPTM4B-201ENST00000445593 SAP18O00422 153 aaKnown RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 FTH1P02794 183 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 CD22P20273 847 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 IST1P53990 364 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 RPS14P62263 151 aaKnown RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 PHC1P78364 1004 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 DMC1Q14565 340 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 MYBPC3Q14896 1274 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 GALNT10Q86SR1 603 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 OFCC1Q8IZS5 231 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 BPIFB1Q8TDL5 484 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 GTF2H4Q92759 462 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 CCT7Q99832 543 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZSCAN5AQ9BUG6 496 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ACAT2Q9BWD1 397 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ANAPC2Q9UJX6 822 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 EI24O14681 340 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 AREL1O15033 823 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 EPHX1P07099 455 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 MYCLP1P12525 358 aaPredicted RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 GPR1P46091 355 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 PFN3P60673 137 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZIK1Q3SY52 487 aaPredicted RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 TRAM1L1Q8N609 369 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 SLC25A37Q9NYZ2 338 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 GPRC5BQ9NZH0 403 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 RAB26Q9ULW5 256 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 DOCK9Q9BZ29 2069 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ATG13O75143 517 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 ENO2P09104 434 aaPredicted RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 HNRNPA1P09651 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 CDKN2CP42773 168 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 CASP9P55211 416 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR4F3Q6IEY1 312 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 AGTRAPQ6RW13 159 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 CLEC4FQ8N1N0 589 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 LIMD1Q9UGP4 676 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 SNX6Q9UNH7 406 aa16.34■□□□□ 0.21
LAPTM4B-201ENST00000445593 HELZP42694 1942 aaKnown RBP16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 AQP12BA6NM10 295 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 JAK1P23458 1154 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 PTPN5P54829 565 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 PWP1Q13610 501 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZNF234Q14588 700 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 FRG2Q64ET8 278 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 AQP12AQ8IXF9 295 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 FAM47BQ8NA70 645 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR2T12Q8NG77 320 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 UBTD2Q8WUN7 234 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 KLK6Q92876 244 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 FRG2BQ96QU4 278 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 CHID1Q9BWS9 393 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 INVSQ9Y283 1065 aa16.33■□□□□ 0.21
LAPTM4B-201ENST00000445593 USP34Q70CQ2 3546 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 FAM58BPP0C7Q3 252 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 PFKLP17858 780 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 SDC1P18827 310 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 CDH15P55291 814 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 USP39Q53GS9 565 aaKnown RBP16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 PLEKHS1Q5SXH7 462 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 ENPP6Q6UWR7 440 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 DPPA4Q7L190 304 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 TMPRSS11BQ86T26 416 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 MARVELD2Q8N4S9 558 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 OR7A2PQ8NGA2 310 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 USP7Q93009 1102 aa16.33■□□□□ 0.2
LAPTM4B-201ENST00000445593 H3BM21 787 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 C6P13671 934 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 CYP4F3Q08477 520 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 GRIK2Q13002 908 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 DOC2AQ14183 400 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 COQ5Q5HYK3 327 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 ZDHHC20Q5W0Z9 365 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 LRRC70Q7Z2Q7 622 aa16.32■□□□□ 0.2
LAPTM4B-201ENST00000445593 TECPR1Q7Z6L1 1165 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms