RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SLC29A1Q99808 456 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 TM9SF3Q9HD45 589 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SLC22A14Q9Y267 594 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 TAF4O00268 1085 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 AP3D1O14617 1153 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF182P17025 639 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SSR2P43308 183 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SLC11A1P49279 550 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 OR4D2P58180 307 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 C6orf141Q5SZD1 244 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 RNF19BQ6ZMZ0 732 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 LARP4Q71RC2 724 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■□□□□ 8.6
TCOF1-206ENST00000445265 MAVSQ7Z434 540 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SCD5Q86SK9 330 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 NAT16Q8N8M0 369 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 OR10G2Q8NGC3 310 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 OR52L1Q8NGH7 329 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PTERQ96BW5 349 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
TCOF1-206ENST00000445265 A0A1B0GW55 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DFNA5O60443 496 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 GADD45GO95257 159 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L2P0CJ85 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L3P0CJ86 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L4P0CJ87 422 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L5P0CJ88 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L6P0CJ89 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4L7P0CJ90 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 MYBPC1Q00872 1141 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 CBX2Q14781 532 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PTGR1Q14914 329 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PTCHD3Q3KNS1 767 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 C10orf53Q8N6V4 93 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 FUBP1Q96AE4 644 aaKnown RBP16.25■□□□□ 0.19
TCOF1-206ENST00000445265 KCNH6Q9H252 994 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SEMA3GQ9NS98 782 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 ABCB8Q9NUT2 735 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 DUX4Q9UBX2 424 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PCTPQ9UKL6 214 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 TCRBV3S1A0A5B6 114 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PCDH7O60245 1069 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 CHRNA1P02708 482 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SEMG2Q02383 582 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PYDC2Q56P42 97 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 CARD16Q5EG05 197 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 KLHL17Q6TDP4 642 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 CFAP206Q8IYR0 622 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 NXPE1Q8N323 547 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 C9orf43Q8TAL5 461 aaPredicted RBP16.25■□□□□ 0.19
TCOF1-206ENST00000445265 TRIB3Q96RU7 358 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 CMTM6Q9NX76 183 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 FZD4Q9ULV1 537 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 GPX3P22352 226 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 PRKACGP22612 351 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 ELK4P28324 431 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CDKL1Q00532 357 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 PTSQ03393 145 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 TIGD6Q17RP2 521 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CES5AQ6NT32 575 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 PSAPL1Q6NUJ1 521 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 BORAQ6PGQ7 559 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 TMEM220Q6QAJ8 160 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CYP4V2Q6ZWL3 525 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 GALNT7Q86SF2 657 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 VANGL1Q8TAA9 524 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 SOX17Q9H6I2 414 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 KLHL1Q9NR64 748 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 C9P02748 559 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 SRPRAP08240 638 aaKnown RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 GTPBP3Q969Y2 492 aaKnown RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 EFCAB11Q9BUY7 163 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 MAGP20916 626 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 TLX1P31314 330 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 MAPK12P53778 367 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CACTIN-AS1Q8N1I8 211 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 XAGE5Q8WWM1 108 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 PRNPP04156 253 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 NFATC2Q13469 925 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CHST15Q7LFX5 561 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-206ENST00000445265 CACUL1Q86Y37 369 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 SLC30A8Q8IWU4 369 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 PHC3Q8NDX5 983 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 TPK1Q9H3S4 243 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 EXD2Q9NVH0 621 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 OARD1Q9Y530 152 aa16.24■□□□□ 0.19
TCOF1-206ENST00000445265 H0Y858 1186 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 HAT1O14929 419 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 CCNKO75909 580 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 KCNA5P22460 613 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 PTPN5P54829 565 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 SPIN4Q56A73 249 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 SH2D5Q6ZV89 423 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 RGL4Q8IZJ4 473 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 FNDC8Q8TC99 324 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 PIK3R3Q92569 461 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 A0A096LPI6 279 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 ATP6V1G1O75348 118 aa16.23■□□□□ 0.19
TCOF1-206ENST00000445265 ARCN1P48444 511 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms