RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 KCNMB4Q86W47 210 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 APLFQ8IW19 511 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 PDIK1LQ8N165 341 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 FBXO15Q8NCQ5 510 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 DENND1AQ8TEH3 1009 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 RUFY1Q96T51 708 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 DHRS4Q9BTZ2 278 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 FBXO6Q9NRD1 293 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 EURLQ9NYK6 297 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 GALPQ9UBC7 116 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 CIDEBQ9UHD4 219 aa18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 RUVBL2Q9Y230 463 aaKnown RBP18.12■□□□□ 0.49
ATPAF2-201ENST00000444058 SPTBP11277 2137 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 MYO1CO00159 1063 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 EIF3FO00303 357 aaPredicted RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CATP04040 527 aaKnown RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CAPN1P07384 714 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CD63P08962 238 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CBSLP0DN79 551 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CBSP35520 551 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 BDKRB1P46663 353 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 PMS2P54278 862 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 DHX9Q08211 1270 aaKnown RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 NAA25Q14CX7 972 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CCSMST1Q4G0I0 132 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 LCN10Q6JVE6 187 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 ZNF549Q6P9A3 640 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 FAM198BQ6UWH4 519 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 CNTN4Q8IWV2 1026 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 KLHL7Q8IXQ5 586 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 C2orf73Q8N5S3 287 aaPredicted RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 C2CD4AQ8NCU7 369 aaPredicted RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 OR9A1PQ8NGU1 263 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 INPP5DQ92835 1189 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 FAM136AQ96C01 138 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 LRRC39Q96DD0 335 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 SPRTNQ9H040 489 aaPredicted RBP18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 TCFL5Q9UL49 500 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 SNX7Q9UNH6 387 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 DHRS7Q9Y394 339 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 SEC16AO15027 2179 aa18.11■□□□□ 0.49
ATPAF2-201ENST00000444058 GCN1Q92616 2671 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 C9J4A7 227 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 HAUS5O94927 633 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 MPC1LP0DKB6 136 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 NCF4Q15080 339 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 DEFB110Q30KQ9 67 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 YOD1Q5VVQ6 348 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 FIGLAQ6QHK4 219 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 GALNT7Q86SF2 657 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 MCATQ8IVS2 390 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 ENDOVQ8N8Q3 282 aaKnown RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 OR2A1Q8NGT9 310 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 GIMAP7Q8NHV1 300 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 C9orf43Q8TAL5 461 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 ABHD17AQ96GS6 310 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 GBP5Q96PP8 586 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 MAN2B2Q9Y2E5 1009 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 PADI2Q9Y2J8 665 aa18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 HEMK1Q9Y5R4 338 aaPredicted RBP18.1■□□□□ 0.49
ATPAF2-201ENST00000444058 BOD1L1Q8NFC6 3051 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 A0A1W2PPV9 198 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ZNF839A8K0R7 811 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ARHGEF33A8MVX0 844 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 NDC80O14777 642 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 SUV39H1O43463 412 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 SRPX2O60687 465 aaPredicted RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 VPS26AO75436 327 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 GRIA3P42263 894 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 SKIV2L2P42285 1042 aaKnown RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 GCGRP47871 477 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ARSFP54793 590 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 RPS18P62269 152 aaKnown RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 PTCHD3Q3KNS1 767 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 MSS51Q4VC12 460 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 TCTE1Q5JU00 501 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 FCRL6Q6DN72 434 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 LRRC8EQ6NSJ5 796 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 UGT3A1Q6NUS8 523 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 HIBCHQ6NVY1 386 aaPredicted RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 TAX1BP1Q86VP1 789 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 FAM20CQ8IXL6 584 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 OR2L3Q8NG85 312 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ADAMTS17Q8TE56 1095 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ASB11Q8WXH4 323 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 SMPDL3AQ92484 453 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 DLG3Q92796 817 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 ZNF285Q96NJ3 590 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 SLC30A3Q99726 388 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 AARSD1Q9BTE6 412 aaKnown RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 NDC1Q9BTX1 674 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 IARS2Q9NSE4 1012 aaKnown RBP18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 KLHL20Q9Y2M5 609 aa18.09■□□□□ 0.49
ATPAF2-201ENST00000444058 MKRN2OSH3BPM6 223 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 GFYI3L273 518 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 J3QKU1 62 aa18.08■□□□□ 0.48
ATPAF2-201ENST00000444058 FANCGO15287 622 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms