RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TCEAL1Q15170 157 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 DBN1Q16643 649 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 KAZNQ674X7 775 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 RHOT2Q8IXI1 618 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 ACBD4Q8NC06 268 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 DNAJC1Q96KC8 554 aaKnown RBP13.76□□□□□ -0.21
HMGN1-208ENST00000443046 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 AAR2Q9Y312 384 aaKnown RBP13.76□□□□□ -0.21
HMGN1-208ENST00000443046 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
HMGN1-208ENST00000443046 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 CRYABP02511 175 aaKnown RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 SERPINA7P05543 415 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 ZGLP1P0C6A0 271 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 COX6A1P12074 109 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 PSMA3P25788 255 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 GRIA3P42263 894 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 NSG1P42857 185 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 KIR3DL1P43629 444 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 GRB7Q14451 532 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 CDSNQ15517 529 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 FAM214AQ32MH5 1076 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 ZC3H12BQ5HYM0 836 aaKnown RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 ITPRIPL1Q6GPH6 555 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 PACS1Q6VY07 963 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 NLRP9Q7RTR0 991 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 STT3BQ8TCJ2 826 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 BRIX1Q8TDN6 353 aaKnown RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 ADAMTS18Q8TE60 1221 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 ELMO1Q92556 727 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 C8orf44Q96CB5 159 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 HAUS1Q96CS2 278 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 C14orf79Q96F83 325 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 POM121Q96HA1 1249 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 CDKN2AIPNLQ96HQ2 116 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 RNF32Q9H0A6 362 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 NLE1Q9NVX2 485 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 PTGFRNQ9P2B2 879 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 SEC14L3Q9UDX4 400 aa13.75□□□□□ -0.21
HMGN1-208ENST00000443046 FEZ2Q9UHY8 353 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 MRPS2Q9Y399 296 aaKnown RBP13.75□□□□□ -0.21
HMGN1-208ENST00000443046 MAP2K7O14733 419 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 PSTPIP1O43586 416 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 KDM1AO60341 852 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 WISP2O76076 250 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 BMP10O95393 424 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 TNNT1P13805 278 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 PSMB4P28070 264 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 UBASH3AP57075 661 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 CACNG1Q06432 222 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ITIH4Q14624 930 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 BRD3Q15059 726 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ANKRD20A2Q5SQ80 823 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ANKRD20A1Q5TYW2 823 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ANKRD20A3Q5VUR7 823 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 FIGLAQ6QHK4 219 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 NAPRTQ6XQN6 538 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 BBS12Q6ZW61 710 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 KATNAL2Q8IYT4 538 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 CCDC110Q8TBZ0 833 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ZUFSPQ96AP4 578 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 SLC22A18Q96BI1 424 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 TBL1YQ9BQ87 522 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ZNF835Q9Y2P0 537 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 KLK4Q9Y5K2 254 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 VPS13CQ709C8 3753 aa13.74□□□□□ -0.21
HMGN1-208ENST00000443046 ANKHD1Q8IWZ3 2542 aaKnown RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 NSG1A0A0A6YYJ2 146 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 TARM1B6A8C7 271 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 APOC4-APOC2K7ER74 178 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 QSOX1O00391 747 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 SRPX2O60687 465 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 CTSVO60911 334 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 RASAL1O95294 804 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 WDPCPO95876 746 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 S1PR4O95977 384 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 MBD3O95983 291 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 APOC2P02655 101 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 FTH1P02794 183 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 CD9P21926 228 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 SRSF11Q05519 484 aaKnown RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 RCOR2Q8IZ40 523 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 METTL27Q8N6F8 245 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 SIRT6Q8N6T7 355 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 TTC29Q8NA56 475 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-208ENST00000443046 OR2L8Q8NGY9 312 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 MIEF2Q96C03 454 aa13.73□□□□□ -0.21
HMGN1-208ENST00000443046 SPOCK3Q9BQ16 436 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms