RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GPR21Q99679 349 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 MIPEPQ99797 713 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 NAT9Q9BTE0 207 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 FAM117AQ9C073 453 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 CHRNA10Q9GZZ6 450 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 ADNPQ9H2P0 1102 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 PPANQ9NQ55 473 aaKnown RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 SPATA7Q9P0W8 599 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 SNX7Q9UNH6 387 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 PLCL2Q9UPR0 1127 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 MAN2B2Q9Y2E5 1009 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 MED16Q9Y2X0 877 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 HEMK1Q9Y5R4 338 aaPredicted RBP20.27■□□□□ 0.84
CDKN3-204ENST00000442975 BOD1L1Q8NFC6 3051 aa20.27■□□□□ 0.84
CDKN3-204ENST00000442975 C9J4A7 227 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 VPS26AO75436 327 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 HAUS5O94927 633 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 MATN4O95460 622 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 HBQ1P09105 142 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 IVDP26440 423 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 GABRA4P48169 554 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 ITGA8P53708 1063 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 IL10RAQ13651 578 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 FAM198BQ6UWH4 519 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 SYVN1Q86TM6 617 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 IGDCC3Q8IVU1 814 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 CPNE9Q8IYJ1 553 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 DNAJC22Q8N4W6 341 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 CD200R1Q8TD46 325 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 SNF8Q96H20 258 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 AARSD1Q9BTE6 412 aaKnown RBP20.26■□□□□ 0.83
CDKN3-204ENST00000442975 TXLNGQ9NUQ3 528 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 SLC17A6Q9P2U8 582 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 RNF14Q9UBS8 474 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 ZC3H7BQ9UGR2 993 aaKnown RBP20.26■□□□□ 0.83
CDKN3-204ENST00000442975 TRMT6Q9UJA5 497 aaKnown RBP20.26■□□□□ 0.83
CDKN3-204ENST00000442975 FARSAQ9Y285 508 aaKnown RBP20.26■□□□□ 0.83
CDKN3-204ENST00000442975 COMMD10Q9Y6G5 202 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 AP1M2Q9Y6Q5 423 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 SPTA1P02549 2419 aa20.26■□□□□ 0.83
CDKN3-204ENST00000442975 EFCAB8A8MWE9 144 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 B8ZZF3 427 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 SEC31AO94979 1220 aaKnown RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 SYF2O95926 243 aaKnown RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 AGXTP21549 392 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 ELK3P41970 407 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 GRIA3P42263 894 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 MRPS25P82663 173 aaKnown RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 NFKB2Q00653 900 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 FASTKQ14296 549 aaKnown RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 FAM69BQ5VUD6 431 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 HIBCHQ6NVY1 386 aaPredicted RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 ZNF517Q6ZMY9 492 aaPredicted RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 C2CD4AQ8NCU7 369 aaPredicted RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 OR9A1PQ8NGU1 263 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 SEC14L1Q92503 715 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 CERS2Q96G23 380 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 ACAT2Q9BWD1 397 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 SLC25A18Q9H1K4 315 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 STARD5Q9NSY2 213 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 EURLQ9NYK6 297 aa20.25■□□□□ 0.83
CDKN3-204ENST00000442975 DHCR7Q9UBM7 475 aaKnown RBP20.25■□□□□ 0.83
CDKN3-204ENST00000442975 MYO1CO00159 1063 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 SLC28A2O43868 658 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 PSIP1O75475 530 aaKnown RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 ENO3P13929 434 aaPredicted RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 PLA2G2AP14555 144 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 MCM3P25205 808 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 CARSP49589 748 aaKnown RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 ARL4CP56559 192 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 SLC9A5Q14940 896 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 NCF4Q15080 339 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 UGT8Q16880 541 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 FCRL6Q6DN72 434 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 FIGLAQ6QHK4 219 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 PIWIL4Q7Z3Z4 852 aaKnown RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 ANKMY2Q8IV38 441 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 MCATQ8IVS2 390 aaKnown RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 OR2L3Q8NG85 312 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 C9orf43Q8TAL5 461 aaPredicted RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 HMGCLL1Q8TB92 370 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 INPP5DQ92835 1189 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 WDR83Q9BRX9 315 aaKnown RBP20.24■□□□□ 0.83
CDKN3-204ENST00000442975 NDC1Q9BTX1 674 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 ABCF3Q9NUQ8 709 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 KLHL42Q9P2K6 505 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 SRPK3Q9UPE1 567 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 KCNMB2Q9Y691 235 aa20.24■□□□□ 0.83
CDKN3-204ENST00000442975 H3BMH7 237 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 SMAPO00193 183 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 RAB40ALP0C0E4 278 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 CBSLP0DN79 551 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 CASQ1P31415 396 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 RPA3P35244 121 aaPredicted RBP20.23■□□□□ 0.83
CDKN3-204ENST00000442975 CBSP35520 551 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 CYP2A13Q16696 494 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 TLDC1Q6P9B6 456 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 NEK10Q6ZWH5 1172 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 PKP4Q99569 1192 aa20.23■□□□□ 0.83
CDKN3-204ENST00000442975 DPH2Q9BQC3 489 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms