RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 FCRL5Q96RD9 977 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 OLFM1Q99784 485 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 GSTO2Q9H4Y5 243 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 LHX3Q9UBR4 397 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SUCOQ9UBS9 1254 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC2A6Q9UGQ3 507 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 LOC100653049A0A140TA62 436 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 MROH6A6NGR9 719 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CCL22O00626 93 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 KMOO15229 486 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 KRT34O76011 436 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 FTH1P02794 183 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATXN1LP0C7T5 689 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 THRAP10827 490 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 EPHA8P29322 1005 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC5A2P31639 672 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF460Q14592 562 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CNGA3Q16281 694 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF789Q5FWF6 425 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 LDLRAP1Q5SW96 308 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 PIP5KL1Q5T9C9 394 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 LARP4Q71RC2 724 aaKnown RBP eCLIP7.2□□□□□ -1.261e-6■■□□□ 13.8
CDC42BPA-208ENST00000442054 TRIM69Q86WT6 500 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SNX32Q86XE0 403 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR13J1Q8NGT2 312 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC26A7Q8TE54 656 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 FRS2Q8WU20 508 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ASB9Q96DX5 294 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF514Q96K75 400 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 MAGEB10Q96LZ2 347 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM74Q96NL1 305 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 RANBP9Q96S59 729 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 HGH1Q9BTY7 390 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 PARD6AQ9NPB6 346 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 VTI1BQ9UEU0 232 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 FKBPLQ9UIM3 349 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 A0A0U1RQS6 177 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR5K4A6NMS3 321 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 VAPBO95292 243 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 EIF2S1P05198 315 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CTSLP07711 333 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 DRD3P35462 400 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 HHEXQ03014 270 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ACVR1Q04771 509 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CYP4F3Q08477 520 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC14A1Q13336 389 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 PDAP1Q13442 181 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CUL3Q13618 768 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CHRNA6Q15825 494 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 GAB4Q2WGN9 574 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 NADK2Q4G0N4 442 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZFP1Q6P2D0 407 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 PNCKQ6P2M8 343 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 MACC1Q6ZN28 852 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 DENND6AQ8IWF6 608 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 TBC1D19Q8N5T2 526 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 KYQ8NBH2 561 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 DRAXINQ8NBI3 349 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 IFI44Q8TCB0 444 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 KCTD4Q8WVF5 259 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 HDAC10Q969S8 669 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SGF29Q96ES7 293 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 SCNM1Q9BWG6 230 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 TDRD1Q9BXT4 1180 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM168Q9H0V1 697 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 THSD1Q9NS62 852 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 RXFP3Q9NSD7 469 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 PACSIN3Q9UKS6 424 aa7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 CFAP20Q9Y6A4 193 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-208ENST00000442054 A0A1B0GTQ1 180 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRORSD1PA6NEY8 169 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NPIPB15A6NHN6 443 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 RPLP0P05388 317 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC1A2P43004 574 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NXPH1P58417 271 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MPP1Q00013 466 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 NFKB2Q00653 900 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ABRQ12979 859 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 FZD5Q13467 585 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 DPPA4Q7L190 304 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 IQCHQ86VS3 1027 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 EPHX4Q8IUS5 362 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SYTL1Q8IYJ3 562 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 RNF31Q96EP0 1072 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ILKAPQ9H0C8 392 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MBNL1Q9NR56 388 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTTG2Q9NZH5 202 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ASCC3Q8N3C0 2202 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MYOCOSA0A1B0GUC4 107 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 GOLGA8TH3BQL2 631 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 FXYD1O00168 92 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLOD2O00469 737 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ALDOCP09972 364 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MYCLP1P12525 358 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 ETS2P15036 469 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 SERPINB5P36952 375 aa7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 LEPRP48357 1165 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMEM115Q12893 351 aaPredicted RBP7.19□□□□□ -1.26
CDC42BPA-208ENST00000442054 MED21Q13503 144 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms