RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 UNCXA6NJT0 531 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 TSPAN12O95859 305 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 ITGB1P05556 798 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 AKR1A1P14550 325 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 CDK10Q15131 360 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 OR2T5Q6IEZ7 315 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 RFPL4BQ6ZWI9 263 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 NRARPQ7Z6K4 114 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 TCAIMQ8N3R3 496 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 OR2T29Q8NH02 315 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 CHAC2Q8WUX2 184 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 APH1BQ8WW43 257 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 CHCHD6Q9BRQ6 235 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 FARSBQ9NSD9 589 aaKnown RBP19.8■□□□□ 0.76
SHOX2-203ENST00000441443 C1orf109Q9NX04 203 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 SNX8Q9Y5X2 465 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 PTCH2Q9Y6C5 1203 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 LAMA2P24043 3122 aaKnown RBP19.8■□□□□ 0.76
SHOX2-203ENST00000441443 LINC00854A0A1B0GVQ3 168 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 IFRD1O00458 451 aaPredicted RBP19.79■□□□□ 0.76
SHOX2-203ENST00000441443 AREL1O15033 823 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 VIPP01282 170 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 OGNP20774 298 aaKnown RBP19.79■□□□□ 0.76
SHOX2-203ENST00000441443 CYP4F2P78329 520 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 RPP38P78345 283 aaKnown RBP19.79■□□□□ 0.76
SHOX2-203ENST00000441443 PIK3R6Q5UE93 754 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 SDHAF4Q5VUM1 108 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 UBQLNLQ8IYU4 475 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 LIX1Q8N485 282 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 KRT84Q9NSB2 600 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 TMEM45AQ9NWC5 275 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 COMMD10Q9Y6G5 202 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 SERPINF2P08697 491 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 POLR2EP19388 210 aaKnown RBP19.79■□□□□ 0.76
SHOX2-203ENST00000441443 TYSND1Q2T9J0 566 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 SNX20Q7Z614 316 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 TSPYL5Q86VY4 417 aaPredicted RBP19.79■□□□□ 0.76
SHOX2-203ENST00000441443 SCN4BQ8IWT1 228 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 PADI3Q9ULW8 664 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 HSPE1-MOB4S4R3N1 261 aa19.79■□□□□ 0.76
SHOX2-203ENST00000441443 MUSKO15146 869 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 CYP7B1O75881 506 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 C1QCP02747 245 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 CRISP3P54108 245 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 FKBP1BP68106 108 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SPANXN2Q5MJ10 180 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 KIAA1614Q5VZ46 1190 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 GOLGA7Q7Z5G4 137 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 ENTHD1Q8IYW4 607 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 OR8H2Q8N162 312 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SIX5Q8N196 739 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 ST6GAL2Q96JF0 529 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 KCNS3Q9BQ31 491 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 TRIM39Q9HCM9 518 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 NOD1Q9Y239 953 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 MN1Q10571 1320 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 PDE4DIPQ5VU43 2346 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 IQCF5A8MTL0 148 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 OR7A17O14581 309 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 TLL1O43897 1013 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 ALX3O95076 343 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 EFNA1P20827 205 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 TP53BP2Q13625 1128 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 LRRC26Q2I0M4 334 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 FAM214AQ32MH5 1076 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 PROX2Q3B8N5 592 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 P3H2Q8IVL5 708 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 NKAPQ8N5F7 415 aaKnown RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 BRSK1Q8TDC3 778 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SIGLEC11Q96RL6 698 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SDHCQ99643 169 aaPredicted RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SH3GL1Q99961 368 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 CSNK1G1Q9HCP0 422 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SIRT5Q9NXA8 310 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SLC12A8A0AV02 714 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 TBKBP1A7MCY6 615 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 CTDSP2O14595 271 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 HSMCR30P0CW71 290 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 PCSK1P29120 753 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 CTGFP29279 349 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 KRR1Q13601 381 aaKnown RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 FAM171A1Q5VUB5 890 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 LRRTM3Q86VH5 581 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 OR4K2Q8NGD2 314 aa19.78■□□□□ 0.76
SHOX2-203ENST00000441443 TRMT6Q9UJA5 497 aaKnown RBP19.78■□□□□ 0.76
SHOX2-203ENST00000441443 SEC22BO75396 215 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 SLC19A1P41440 591 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 NUDT6P53370 316 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 MLLT6P55198 1093 aaPredicted RBP19.77■□□□□ 0.76
SHOX2-203ENST00000441443 GALK2Q01415 458 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 CHRNEQ04844 493 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 GPR153Q6NV75 609 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 MSANTD2Q6P1R3 559 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 VTCN1Q7Z7D3 282 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 CIR1Q86X95 450 aaPredicted RBP19.77■□□□□ 0.76
SHOX2-203ENST00000441443 OR52E4Q8NGH9 312 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 IPCEF1Q8WWN9 437 aaPredicted RBP19.77■□□□□ 0.76
SHOX2-203ENST00000441443 ADAM2Q99965 735 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 ZBED2Q9BTP6 218 aa19.77■□□□□ 0.76
SHOX2-203ENST00000441443 SAMHD1Q9Y3Z3 626 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms