RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ASB8Q9H765 288 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SERHLQ9NQF3 203 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PAK1IP1Q9NWT1 392 aaPredicted RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 WARS2Q9UGM6 360 aaKnown RBP16■□□□□ 0.15
CLCNKA-203ENST00000439316 BAG5Q9UL15 447 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 ERGIC3Q9Y282 383 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 PCDHB14Q9Y5E9 798 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 SNX5Q9Y5X3 404 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 CDH23Q9H251 3354 aa16■□□□□ 0.15
CLCNKA-203ENST00000439316 FUOMA2VDF0 154 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 BCAS1O75363 584 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 RECQL5O94762 991 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 FUCA1P04066 466 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 CCDC159P0C7I6 412 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 ACRV1P26436 265 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 GP2P55259 537 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 PPP1R8Q12972 351 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 SGO1Q5FBB7 561 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 TPGS2Q68CL5 300 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 CRTC3Q6UUV7 619 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 MACC1Q6ZN28 852 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 HIPK1Q86Z02 1210 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 C10orf111Q8N326 155 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 CLDN19Q8N6F1 224 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 ARL10Q8N8L6 244 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 ABHD11Q8NFV4 315 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 NETO1Q8TDF5 533 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 FRS2Q8WU20 508 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 FAM120BQ96EK7 910 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 NODALQ96S42 347 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 KLF16Q9BXK1 252 aaPredicted RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 DGCR6LQ9BY27 220 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 MRPL17Q9NRX2 175 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 OR51B4Q9Y5P0 310 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 CHD9Q3L8U1 2897 aa15.99■□□□□ 0.15
CLCNKA-203ENST00000439316 E2F6O75461 281 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PORP16435 677 aaPredicted RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 EPB42P16452 691 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 HMGA1P17096 107 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PRKACGP22612 351 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 MAGEA2P43356 314 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 RAD23AP54725 363 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 VAC14Q08AM6 782 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 LYPLAL1Q5VWZ2 237 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PARP8Q8N3A8 854 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 CLHC1Q8NHS4 586 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 ULK4Q96C45 1275 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 ACPTQ9BZG2 426 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 GABARAPL1Q9H0R8 117 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 ZFYVE1Q9HBF4 777 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 IL26Q9NPH9 171 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 DNMT3BQ9UBC3 853 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 VPS51Q9UID3 782 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PCDHGB1Q9Y5G3 927 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 C1orf232A0A0U1RR37 186 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 BCKDKO14874 412 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 WNT9AO14904 365 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 INMTO95050 263 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PFKLP17858 780 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PTPN6P29350 595 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 CA8P35219 290 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 GGT5P36269 586 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 CLDN8P56748 225 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 RPS14P62263 151 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 ATP1A4Q13733 1029 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 RAB33AQ14088 237 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 CTF1Q16619 201 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 RGS21Q2M5E4 152 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 GRAMD4Q6IC98 578 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 SHQ1Q6PI26 577 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 DET1Q7L5Y6 550 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 IGFN1Q86VF2 1251 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 KLHL23Q8NBE8 558 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 TTC16Q8NEE8 873 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 CLP1Q92989 425 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 TBC1D20Q96BZ9 403 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PYURFQ96I23 114 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 REXO5Q96IC2 774 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 RNF38Q9H0F5 515 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 TRIT1Q9H3H1 467 aaKnown RBP15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 VNN3Q9NY84 501 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 TRPM5Q9NZQ8 1165 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 STOML2Q9UJZ1 356 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 ORC6Q9Y5N6 252 aa15.98■□□□□ 0.15
CLCNKA-203ENST00000439316 PDE4DIPQ5VU43 2346 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 M0QX08 132 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 PER2O15055 1255 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 TEX28O15482 410 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 TBL1XO60907 577 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 STK16O75716 305 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 KRT6AP02538 564 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 KRT6BP04259 564 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 EPORP19235 508 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 OPRL1P41146 370 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 KRT6CP48668 564 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 BCAP31P51572 246 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 RELAQ04206 551 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 CDK5R2Q13319 367 aa15.97■□□□□ 0.15
CLCNKA-203ENST00000439316 CDKN3Q16667 212 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms