RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CCL26Q9Y258 94 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TMEM98Q9Y2Y6 226 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIM43BA6NCK2 446 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 E7ENX8 843 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TSPAN6O43657 245 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 PAK4O96013 591 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RPL10P27635 214 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 NTSP30990 170 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ASMTP46597 345 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF140P52738 457 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 C2orf80Q0P641 193 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 FRG2Q64ET8 278 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIM73Q86UV7 250 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZFP28Q8NHY6 868 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRTOMTQ8WZ04 291 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIM43Q96BQ3 446 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 FRG2BQ96QU4 278 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 FAIM2Q9BWQ8 316 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 REXO4Q9GZR2 422 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RSL24D1Q9UHA3 163 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RNF11Q9Y3C5 154 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 PTGDR2Q9Y5Y4 395 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 A0A087WXM4 84 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZDHHC11BP0C7U3 371 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 AQP1P29972 269 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 MAGEA10P43363 369 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 BDKRB1P46663 353 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 MTPNP58546 118 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 AGTRAPQ6RW13 159 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ERN2Q76MJ5 926 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADGRG6Q86SQ4 1221 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 KBTBD6Q86V97 674 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 KDM1BQ8NB78 822 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 GPR150Q8NGU9 434 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 FUBP1Q96AE4 644 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CD244Q9BZW8 370 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ITM2CQ9NQX7 267 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 SMIM31A0A1B0GVY4 71 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 KIAA0355O15063 1070 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 MAGEB3O15480 346 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZW10O43264 779 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CLIC3O95833 236 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TFPTP0C1Z6 253 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ALOX12P18054 663 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RRM2P31350 389 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CLCNKAP51800 687 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RUNX3Q13761 415 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CCNYL2Q5T2Q4 361 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ANXA8L1Q5VT79 327 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 CXorf57Q6NSI4 855 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRRTM4Q86VH4 590 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR10A6Q8NH74 314 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 TFGQ92734 400 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 SHDQ96IW2 340 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 LHX3Q9UBR4 397 aa11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-202ENST00000438773 ARID1BQ8NFD5 2236 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF195O14628 629 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 HOXB2P14652 356 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 NCK1P16333 377 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 UFM1P61960 85 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 SH3BP2P78314 561 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ATAD3BQ5T9A4 648 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 MBOAT1Q6ZNC8 495 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 BHLHA9Q7RTU4 235 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 GLB1L3Q8NCI6 653 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR52B6Q8NGF0 335 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 SPPL3Q8TCT6 385 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 UTP15Q8TED0 518 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF382Q96SR6 550 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 RIBC2Q9H4K1 309 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 REEP1Q9H902 201 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 PDLIM1O00151 329 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 CST1P01037 141 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZNF10P21506 573 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 CDKL1Q00532 357 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ILF3Q12906 894 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZC3H12BQ5HYM0 836 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 SYVN1Q86TM6 617 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 PROSER1Q86XN7 944 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 RPS6KA6Q9UK32 745 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 PSME4Q14997 1843 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 IL6P05231 212 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 G6PDP11413 515 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms