RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ALDOCP09972 364 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PRSS56P0CW18 603 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SMIM18P0DKX4 95 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SELPP16109 830 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 NTSP30990 170 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GPR1P46091 355 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 HNMTP50135 292 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 HTR6P50406 440 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CLCN4P51793 760 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 VBP1P61758 197 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TGM3Q08188 693 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 DSC3Q14574 896 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 DUOXA1Q1HG43 343 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 HSF5Q4G112 596 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PYDC2Q56P42 97 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 NEK5Q6P3R8 708 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FAM171BQ6P995 826 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ALKAL1Q6UXT8 129 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RNF19BQ6ZMZ0 732 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FAM92BQ6ZTR7 304 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RAB43Q86YS6 212 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RBM12BQ8IXT5 1001 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 YAF2Q8IY57 180 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CHCHD4Q8N4Q1 142 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 DBF4BQ8NFT6 615 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 AP3S1Q92572 193 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MAELQ96JY0 434 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 UBXN10Q96LJ8 280 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SLC38A2Q96QD8 506 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SLC30A3Q99726 388 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 HTATIP2Q9BUP3 242 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FNDC11Q9BVV2 318 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ACAT2Q9BWD1 397 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ITPAQ9BY32 194 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SERHL2Q9H4I8 314 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SERHLQ9NQF3 203 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CD84Q9UIB8 345 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ENTPD4Q9Y227 616 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PRRC2BQ5JSZ5 2229 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PIPSLA2A3N6 862 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 LDB2O43679 373 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GABBR2O75899 941 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CCNB2O95067 398 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CLDN7O95471 211 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 POP4O95707 220 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 C9P02748 559 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ELFN1P0C7U0 828 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ELNP15502 786 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GGT1P19440 569 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GSTM2P28161 218 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ARRB2P32121 409 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TIE1P35590 1138 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GRIA2P42262 883 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MAPK9P45984 424 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 IST1P53990 364 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CCL23P55773 120 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 AP1S2P56377 157 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RAB14P61106 215 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TUBA1BP68363 451 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ABRAXAS2Q15018 415 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PTCHD3Q3KNS1 767 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF404Q494X3 552 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SLC36A3Q495N2 470 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZFP69Q49AA0 526 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RAET1GQ6H3X3 334 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TUBA1AQ71U36 451 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF280BQ86YH2 543 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GPR65Q8IYL9 337 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 DTWD1Q8N5C7 304 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SCAIQ8N9R8 606 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GPR150Q8NGU9 434 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CNIH3Q8TBE1 160 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PIK3R3Q92569 461 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 C1GALT1C1Q96EU7 318 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CORO1BQ9BR76 489 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FUNDC2Q9BWH2 189 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 KCNH6Q9H252 994 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CSNK1G1Q9HCP0 422 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CREBZFQ9NS37 354 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 OLAHQ9NV23 265 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 THUMPD1Q9NXG2 353 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RIMKLBQ9ULI2 386 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 FZD4Q9ULV1 537 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SLC22A14Q9Y267 594 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ASF1AQ9Y294 204 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 UNCXA6NJT0 531 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GRM6O15303 877 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 SLC28A2O43868 658 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GUCY1B2O75343 617 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 GADD45GO95257 159 aa6.52□□□□□ -1.37
CSDE1-205ENST00000438362 RPS17P08708 135 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 AZGP1P25311 298 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 RPL10P27635 214 aaKnown RBP6.52□□□□□ -1.37
CSDE1-205ENST00000438362 ADRA1AP35348 466 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms