RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RIOK2Q9BVS4 552 aaKnown RBP15.52■□□□□ 0.08
PTPN13-204ENST00000436978 IFT27Q9BW83 186 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 FLRT1Q9NZU1 646 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 RGS20O76081 388 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 PLGP00747 810 aaPredicted RBP15.52■□□□□ 0.08
PTPN13-204ENST00000436978 ACTR1BP42025 376 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 ACTR1AP61163 376 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 GEMIN6Q8WXD5 167 aaKnown RBP15.52■□□□□ 0.08
PTPN13-204ENST00000436978 ACOT12Q8WYK0 555 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 LPGAT1Q92604 370 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 OXSMQ9NWU1 459 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 INSL5Q9Y5Q6 135 aa15.52■□□□□ 0.08
PTPN13-204ENST00000436978 AKAP8O43823 692 aaKnown RBP15.52■□□□□ 0.07
PTPN13-204ENST00000436978 SOD2P04179 222 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 BPIFB1Q8TDL5 484 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 IRF7Q92985 503 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 CPNE2Q96FN4 548 aaPredicted RBP15.52■□□□□ 0.07
PTPN13-204ENST00000436978 PCDHGA2Q9Y5H1 932 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 TYRP14679 529 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 SLC10A7Q0GE19 358 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 PHF19Q5T6S3 580 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 C7orf57Q8NEG2 295 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 NR4A3Q92570 626 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 ZIM2Q9NZV7 527 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 PEX10O60683 326 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 RABGGTBP53611 331 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 PCDH1Q08174 1060 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 KLK6Q92876 244 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 EPYCQ99645 322 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 BTBD1Q9H0C5 482 aa15.52■□□□□ 0.07
PTPN13-204ENST00000436978 H0YGN5 161 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 ACP5P13686 325 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 LAPTM4BQ86VI4 370 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 NAT8LQ8N9F0 302 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 NADKO95544 446 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 QPCTQ16769 361 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 LACTB2Q53H82 288 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 OR10H4Q8NGA5 316 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 ZNF726A6NNF4 738 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 ANKRD66B4E2M5 251 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 SLC5A9Q2M3M2 681 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 C6orf52Q5T4I8 152 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 VWA5B1Q5TIE3 1220 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 PAOXQ6QHF9 649 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 PIGKQ92643 395 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 GTPBP3Q969Y2 492 aaKnown RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 AHCYL1O43865 530 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 ISLR2Q6UXK2 745 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 AKAP14Q86UN6 197 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 ALKBH4Q9NXW9 302 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 A0A1W2PRB8 838 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 CSNK2A2P19784 350 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 SLC8B1Q6J4K2 584 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 OR5T3Q8NGG3 340 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 GDF10P55107 478 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 RNF121Q9H920 327 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 PLCH1Q4KWH8 1693 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 NFKBIEO00221 500 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 F2P00734 622 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 C5orf22Q49AR2 442 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 SYPL2Q5VXT5 272 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 OTUB2Q96DC9 234 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 C11orf24Q96F05 449 aaPredicted RBP15.51■□□□□ 0.07
PTPN13-204ENST00000436978 HHATLQ9HCP6 504 aa15.51■□□□□ 0.07
PTPN13-204ENST00000436978 KLK3P07288 261 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 CXCR1P25024 350 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SLC7A1P30825 629 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 TARDBPQ13148 414 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SERINC3Q13530 473 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 C10orf62Q5T681 223 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 AHSA2Q719I0 299 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 TLCD1Q96CP7 247 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 TESMINQ9Y4I5 508 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 HOXB2P14652 356 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 MSX2P35548 267 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 MS4A13Q5J8X5 152 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SMYD5Q6GMV2 418 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SMARCD3Q6STE5 483 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 OLFML1Q6UWY5 402 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 PAMR1Q6UXH9 720 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 LYSMD3Q7Z3D4 306 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 DCBLD1Q8N8Z6 715 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 OR5K1Q8NHB7 308 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 LENG8Q96PV6 779 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 ECI2O75521 394 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 IRF9Q00978 393 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 FSTL1Q12841 308 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 PDSS1Q5T2R2 415 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SH3PXD2AQ5TCZ1 1133 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 PNLDC1Q8NA58 520 aaKnown RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 WRAP73Q9P2S5 460 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 NUMA1Q14980 2115 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 RNF225M0QZC1 329 aaPredicted RBP15.5■□□□□ 0.07
PTPN13-204ENST00000436978 INCA1Q0VD86 236 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 PHF12Q96QT6 1004 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 CST11Q9H112 138 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 TELO2Q9Y4R8 837 aa15.5■□□□□ 0.07
PTPN13-204ENST00000436978 SAP18O00422 153 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms