RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HMGCLL1Q8TB92 370 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 ATP6V1E2Q96A05 226 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 RABEP2Q9H5N1 569 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 ZDHHC2Q9UIJ5 367 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 ICKQ9UPZ9 632 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 RALGAPA1Q6GYQ0 2036 aa22.29■■□□□ 1.16
CPSF4-204ENST00000436336 PATE3B3GLJ2 98 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 OR7A17O14581 309 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 YKT6O15498 198 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 OTCP00480 354 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 TROVE2P10155 538 aaKnown RBP eCLIP22.28■■□□□ 1.16
CPSF4-204ENST00000436336 CCNG1P51959 295 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 CDC16Q13042 620 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 DEFB133Q30KQ1 61 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 HLA-BQ31612 363 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SH2D4BQ5SQS7 431 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SNX31Q8N9S9 440 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 OR2L8Q8NGY9 312 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 MIPEPQ99797 713 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 NTMT1Q9BV86 223 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 TRIM55Q9BYV6 548 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 PNPOQ9NVS9 261 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 ESRRBO95718 433 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 KITP10721 976 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 EPHA8P29322 1005 aaPredicted RBP22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SHMT2P34897 504 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 MPLP40238 635 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 HK2P52789 917 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 OGFOD3Q6PK18 319 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 WDR75Q8IWA0 830 aaKnown RBP22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SFTPA2Q8IWL1 248 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SLC25A45Q8N413 288 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 OR52B6Q8NGF0 335 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 BCAS4Q8TDM0 211 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SETD7Q8WTS6 366 aaKnown RBP22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SMPDL3AQ92484 453 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 FSCN3Q9NQT6 498 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 GPRC5BQ9NZH0 403 aa22.28■■□□□ 1.16
CPSF4-204ENST00000436336 MARCOQ9UEW3 520 aaPredicted RBP22.28■■□□□ 1.16
CPSF4-204ENST00000436336 SYPP08247 313 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 FGF4P08620 206 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 EPORP19235 508 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 SUSD1Q6UWL2 747 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 GPRIN3Q6ZVF9 776 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 C17orf82Q86X59 251 aaPredicted RBP22.27■■□□□ 1.16
CPSF4-204ENST00000436336 AGR3Q8TD06 166 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 LCN9Q8WX39 176 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 OR4K3Q96R72 315 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 PRRX2Q99811 253 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 ARRDC1-AS1Q9H2J1 176 aa22.27■■□□□ 1.16
CPSF4-204ENST00000436336 STN1Q9H668 368 aaKnown RBP22.27■■□□□ 1.16
CPSF4-204ENST00000436336 SLCO1B7G3V0H7 640 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ARHGAP33O14559 1287 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NOBOXO60393 691 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 PRDX3P30048 256 aaKnown RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 FASLGP48023 281 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 HHEXQ03014 270 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 TRAF3Q13114 568 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 TSTA3Q13630 321 aaPredicted RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 GPR18Q14330 331 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 LCTLQ6UWM7 567 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 SYVN1Q86TM6 617 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 AMIGO1Q86WK6 493 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 AFAP1L2Q8N4X5 818 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 LMNTD1Q8N9Z9 388 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 LINC01555Q8NAE3 123 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NRTNQ99748 197 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ELAC2Q9BQ52 826 aaKnown RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 SIKE1Q9BRV8 207 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 LRFN3Q9BTN0 628 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NUSAP1Q9BXS6 441 aaKnown RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 PCBD2Q9H0N5 130 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 XKR8Q9H6D3 395 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 GAREM1Q9H706 876 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 TNFRSF12AQ9NP84 129 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NPHS2Q9NP85 383 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 OR6C2Q9NZP2 312 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ZNF225Q9UK10 706 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 KCNE2Q9Y6J6 123 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 A0A1B0GTL3 188 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 CER1O95813 267 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 EBLN1P0CF75 366 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 NPPBP16860 134 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ARL1P40616 181 aaPredicted RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 GABPB1Q06547 395 aaPredicted RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 PLCL1Q15111 1095 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 C6orf132Q5T0Z8 1188 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 THEMIS2Q5TEJ8 643 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 PRAMEF13Q5VWM6 474 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 MILR1Q7Z6M3 343 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 PIGWQ7Z7B1 504 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 CLYBLQ8N0X4 340 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ARL14Q8N4G2 192 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 C2orf73Q8N5S3 287 aaPredicted RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 OR4F6Q8NGB9 312 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ZNF473Q8WTR7 871 aaKnown RBP22.26■■□□□ 1.15
CPSF4-204ENST00000436336 FAR2Q96K12 515 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 HAUS8Q9BT25 410 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 ABCF3Q9NUQ8 709 aa22.26■■□□□ 1.15
CPSF4-204ENST00000436336 KLHL14Q9P2G3 628 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms