RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 PYROXD1Q8WU10 500 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 RNF31Q96EP0 1072 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 NDNQ99608 321 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 SLC12A9Q9BXP2 914 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 FAM60AQ9NP50 221 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 SAYSD1Q9NPB0 183 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 NSMCE4AQ9NXX6 385 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 MOCS1Q9NZB8 636 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.67■□□□□ 0.1
SMPD4-207ENST00000435455 KCND3Q9UK17 655 aa15.67■□□□□ 0.1
SMPD4-207ENST00000435455 KALRNO60229 2985 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 E7EQ34 232 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 GFYI3L273 518 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 ATXN7O15265 892 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-207ENST00000435455 ZBTB14O43829 449 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 PRICKLE3O43900 615 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-207ENST00000435455 ITGB2P05107 769 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 HBQ1P09105 142 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 MAGP20916 626 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 DLSTP36957 453 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 PLTPP55058 493 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 TIAL1Q01085 375 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMPD4-207ENST00000435455 NAA25Q14CX7 972 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.66■□□□□ 0.1
SMPD4-207ENST00000435455 RBM20Q5T481 1227 aaKnown RBP15.66■□□□□ 0.1
SMPD4-207ENST00000435455 C8orf74Q6P047 294 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 FIGLAQ6QHK4 219 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 SLC26A11Q86WA9 606 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 PALM2Q8IXS6 379 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 MNS1Q8NEH6 495 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 SMPDL3AQ92484 453 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 LRFN5Q96NI6 719 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 LHX9Q9NQ69 397 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 SLC17A6Q9P2U8 582 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 IL17BQ9UHF5 180 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 CROTQ9UKG9 612 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 ATRXP46100 2492 aa15.66■□□□□ 0.1
SMPD4-207ENST00000435455 ANKRD12Q6UB98 2062 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 KRT87PA6NCN2 255 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 C21orf140B9A014 251 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 KLK3P07288 261 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 GABRA4P48169 554 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 CDKN2DP55273 166 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 CRTC2Q53ET0 693 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 SOWAHCQ53LP3 525 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 TAF1BQ53T94 588 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 FAM45BPQ6NSW5 357 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 CYHR1Q6ZMK1 362 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 UBE2R2Q712K3 238 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 PIWIL4Q7Z3Z4 852 aaKnown RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 MYO1HQ8N1T3 1032 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 DNAJC22Q8N4W6 341 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 GPATCH11Q8N954 259 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 FAM45AQ8TCE6 357 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 FBXO25Q8TCJ0 367 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 EEF1AKMT1Q8WVE0 214 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 TTC9Q92623 222 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 ZUFSPQ96AP4 578 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 FAM117AQ9C073 453 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 ACTR5Q9H9F9 607 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-207ENST00000435455 PLCL2Q9UPR0 1127 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 VWA7Q9Y334 891 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 KLK4Q9Y5K2 254 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 AP1M2Q9Y6Q5 423 aa15.65■□□□□ 0.1
SMPD4-207ENST00000435455 A0A1W2PPV9 198 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 TARM1B6A8C7 271 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 TK2O00142 265 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 TERTO14746 1132 aaKnown RBP15.64■□□□□ 0.09
SMPD4-207ENST00000435455 OR2B3O76000 313 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 C8GP07360 202 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 GSTA2P09210 222 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 TCN2P20062 427 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 RPA3P35244 121 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PNLIPRP1P54315 467 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 IL2P60568 153 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PDAP1Q13442 181 aaKnown RBP15.64■□□□□ 0.09
SMPD4-207ENST00000435455 DNASE1L3Q13609 305 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 DEFB110Q30KQ9 67 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
SMPD4-207ENST00000435455 HECTD2Q5U5R9 776 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PAQR3Q6TCH7 311 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 FAM20CQ8IXL6 584 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 MCOLN3Q8TDD5 553 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 CT55Q8WUE5 264 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 STARD8Q92502 1023 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 CLIP3Q96DZ5 547 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 CATSPER2Q96P56 530 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PKP4Q99569 1192 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 MIPEPQ99797 713 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 GPR87Q9BY21 358 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 SLC7A5P2Q9GIP4 190 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PCDHGA6Q9Y5G7 932 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 PSAT1Q9Y617 370 aa15.64■□□□□ 0.09
SMPD4-207ENST00000435455 HEATR5BQ9P2D3 2071 aa15.63■□□□□ 0.09
SMPD4-207ENST00000435455 EIF4E1BA6NMX2 242 aaKnown RBP15.63■□□□□ 0.09
SMPD4-207ENST00000435455 MEN1O00255 615 aa15.63■□□□□ 0.09
SMPD4-207ENST00000435455 ZNF749O43361 778 aa15.63■□□□□ 0.09
SMPD4-207ENST00000435455 SLC16A8O95907 504 aa15.63■□□□□ 0.09
SMPD4-207ENST00000435455 SYF2O95926 243 aaKnown RBP15.63■□□□□ 0.09
SMPD4-207ENST00000435455 FDXRP22570 491 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms