RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OR2T3Q8NH03 318 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 ZNF480Q8WV37 535 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 ASB9Q96DX5 294 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 ZNF514Q96K75 400 aaPredicted RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 LINC00615Q96LM1 132 aaPredicted RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 ZNF570Q96NI8 536 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 NRTNQ99748 197 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 C1orf109Q9NX04 203 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 GPR34Q9UPC5 381 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 EIF3LQ9Y262 564 aaKnown RBP16.19■□□□□ 0.18
USHBP1-203ENST00000431146 PIAS3Q9Y6X2 628 aa16.19■□□□□ 0.18
USHBP1-203ENST00000431146 HOXB2P14652 356 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SLC6A2P23975 617 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 BMP8BP34820 402 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 GCKP35557 465 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 DDX39BQ13838 428 aaKnown RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 DOC2AQ14183 400 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 ADNP2Q6IQ32 1131 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 DHDDSQ86SQ9 333 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SPATA24Q86W54 205 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SLC15A3Q8IY34 581 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 KBTBD2Q8IY47 623 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 HM13Q8TCT9 377 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 ATL1Q8WXF7 558 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 MYOCQ99972 504 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 FZD3Q9NPG1 666 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 GID8Q9NWU2 228 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 CMTM6Q9NX76 183 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SUCOQ9UBS9 1254 aaKnown RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 PLAGL1Q9UM63 463 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 DLGAP4Q9Y2H0 992 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 CFAP20Q9Y6A4 193 aaKnown RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 A0A1W2PQF6 199 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 MGAT4DA6NG13 374 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 JUPP14923 745 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SOX11P35716 441 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 MAP7D1Q3KQU3 841 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 RABL3Q5HYI8 236 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SAMD4BQ5PRF9 694 aaKnown RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 C6orf10Q5SRN2 563 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 C1QTNF12Q5T7M4 302 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 FRG2Q64ET8 278 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SDE2Q6IQ49 451 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 RNF165Q6ZSG1 346 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 MINDY1Q8N5J2 469 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 C2orf73Q8N5S3 287 aaPredicted RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 FRG2BQ96QU4 278 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 MTERF1Q99551 399 aaKnown RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 GABRG3Q99928 467 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 TTYH1Q9H313 450 aaPredicted RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 CD93Q9NPY3 652 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 LEF1Q9UJU2 399 aaPredicted RBP16.18■□□□□ 0.18
USHBP1-203ENST00000431146 SH2B3Q9UQQ2 575 aa16.18■□□□□ 0.18
USHBP1-203ENST00000431146 C17orf113A0A1B0GUU1 675 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 C2CD4DB7Z1M9 353 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 SH3BGRLO75368 114 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 DNTTP04053 509 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
USHBP1-203ENST00000431146 TBPL1P62380 186 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 KIAA0040Q15053 153 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 LPCAT4Q643R3 524 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 AMZ2Q86W34 360 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 OR56A3Q8NH54 315 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 TSPEARQ8WU66 669 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 APIPQ96GX9 242 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 TMEM74Q96NL1 305 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 IL17FQ96PD4 163 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 HOPXQ9BPY8 73 aaPredicted RBP16.17■□□□□ 0.18
USHBP1-203ENST00000431146 ZDHHC5Q9C0B5 715 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 OR52A5Q9H2C5 316 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 WDR26Q9H7D7 661 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 LIMD1Q9UGP4 676 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 TRIOBPQ9H2D6 2365 aa16.17■□□□□ 0.18
USHBP1-203ENST00000431146 A0A1W2PQU0 124 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 LATO43561 262 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 BCKDHAP12694 445 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 JAK1P23458 1154 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 RPL10P27635 214 aaKnown RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 ACADLP28330 430 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 MAD2L1Q13257 205 aaPredicted RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 COQ5Q5HYK3 327 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 CACHD1Q5VU97 1274 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 LRRTM4Q86VH4 590 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 KIAA2013Q8IYS2 634 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 TP53I13Q8NBR0 393 aaPredicted RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 OR5AR1Q8NGP9 310 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 DNAJC9Q8WXX5 260 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 NEIL2Q969S2 332 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 DPY30Q9C005 99 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 ABCD2Q9UBJ2 740 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 EGFL7Q9UHF1 273 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 MCM8Q9UJA3 840 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 ASF1AQ9Y294 204 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 LRRC42Q9Y546 428 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 GRXCR2A6NFK2 248 aa16.16■□□□□ 0.18
USHBP1-203ENST00000431146 IFRD1O00458 451 aaPredicted RBP16.16■□□□□ 0.18
USHBP1-203ENST00000431146 FUCA1P04066 466 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms