RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SMG1Q96Q15 3661 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 LOC400499M0QZD8 3231 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 FAM159BA6NKW6 160 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 SLC16A5O15375 505 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 DLGAP3O95886 979 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 MT-ND3P03897 115 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 ERGP11308 486 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 OAS2P29728 719 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 GPX6P59796 221 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 SP140Q13342 867 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 C6orf15Q6UXA7 325 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 UBE2R2Q712K3 238 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 LMNTD1Q8N9Z9 388 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 MCOLN3Q8TDD5 553 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 DENND1AQ8TEH3 1009 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 SMPDL3AQ92484 453 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 N4BP2L2Q92802 583 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 CRELD1Q96HD1 420 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 VPS39Q96JC1 886 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 PKP4Q99569 1192 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 CPNE1Q99829 537 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 KLHL25Q9H0H3 589 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-203ENST00000431127 IGSF10Q6WRI0 2623 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 FAM95CA0A1B0GW59 222 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 PRICKLE3O43900 615 aaPredicted RBP16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 KIAA0754O94854 1291 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 SYF2O95926 243 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 CYP2A7P20853 494 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 VAC14Q08AM6 782 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 ABHD18Q0P651 414 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 PWWP2BQ6NUJ5 590 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 CDHR3Q6ZTQ4 885 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 RELL1Q8IUW5 271 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 TMEM126BQ8IUX1 230 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 ZSCAN1Q8NBB4 408 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 IFT81Q8WYA0 676 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 KIAA1143Q96AT1 154 aaPredicted RBP16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 LINGO1Q96FE5 620 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 OLFM1Q99784 485 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 MCMBPQ9BTE3 642 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 EFHD1Q9BUP0 239 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 SLC12A9Q9BXP2 914 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 PRORYQ9H606 182 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 SDK2Q58EX2 2172 aa16.75■□□□□ 0.27
CTDSP1-203ENST00000431127 CXorf49A8MYA2 514 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 TARM1B6A8C7 271 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 TMEM150CB9EJG8 249 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 K7ENP7 123 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 SCRG1O75711 98 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 SLC16A8O95907 504 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 CCNYL3P0C7X3 344 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 ZNF28P17035 718 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 SAT1P21673 171 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 GP5P40197 560 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 PNLIPRP1P54315 467 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 SLC12A2P55011 1212 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 CXADRP78310 365 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 POU4F1Q01851 419 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 NAB1Q13506 487 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 ZIC1Q15915 447 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 INO80CQ6PI98 192 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 TIPARPQ7Z3E1 657 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 CTAGE3PQ8IX95 158 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 GPR135Q8IZ08 494 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 SNRNP27Q8WVK2 155 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 ZUFSPQ96AP4 578 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 PDLIM5Q96HC4 596 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 CCDC138Q96M89 665 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 FMO2Q99518 471 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 PARVBQ9HBI1 364 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 POPDC3Q9HBV1 291 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 PCDHB3Q9Y5E6 796 aa16.74■□□□□ 0.27
CTDSP1-203ENST00000431127 A0A1W2PPV9 198 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 KRT87PA6NCN2 255 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 PABPN1LA6NDY0 278 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 CPNE3O75131 537 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 TIAF1O95411 115 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 TSPAN12O95859 305 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 HIST1H2AGP0C0S8 130 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 HIST1H2ADP20671 130 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 MAGP20916 626 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 PHBP35232 272 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 RPA3P35244 121 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 ITGA1P56199 1179 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 KBTBD12Q3ZCT8 623 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 ZC3H12BQ5HYM0 836 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 GRTP1Q5TC63 336 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 GPR155Q7Z3F1 870 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 VASH2Q86V25 355 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 SYTL1Q8IYJ3 562 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 DNAJC22Q8N4W6 341 aa16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 NKAPQ8N5F7 415 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-203ENST00000431127 GALNT6Q8NCL4 622 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms