RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ERN1O75460 977 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PRKRAO75569 313 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CBR3O75828 277 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 SLCO2B1O94956 709 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RPP14O95059 124 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MATN4O95460 622 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 TXNP10599 105 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 HNRNPH3P31942 346 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ALDH9A1P49189 494 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF157P51786 506 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PRKAG1P54619 331 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 VLDLRP98155 873 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 AUHQ13825 339 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 GPNMBQ14956 572 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 EIF2S3LQ2VIR3 472 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 KHDC1Q4VXA5 237 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PRSS55Q6UWB4 352 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RAD9BQ6WBX8 426 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 USP49Q70CQ1 688 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RBM45Q8IUH3 476 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MISPQ8IVT2 679 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CREB3L4Q8TEY5 395 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PPP1R13LQ8WUF5 828 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 IP6K1Q92551 441 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF516Q92618 1163 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 GAL3ST3Q96A11 431 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 DAZAP1Q96EP5 407 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RUSC1Q9BVN2 902 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RIOK2Q9BVS4 552 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MINDY3Q9H8M7 445 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 LRRC4Q9HBW1 653 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PAK6Q9NQU5 681 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PRMT7Q9NVM4 692 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 DZANK1Q9NVP4 752 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CNIH4Q9P003 139 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 IGSF9Q9P2J2 1179 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 COPG2Q9UBF2 871 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 SIX4Q9UIU6 781 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RRBP1Q9P2E9 1410 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 BAZ2BQ9UIF8 2168 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 A0A1W2PPQ1 181 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 SAGE2PA6NJ88 616 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 H3BNC9 293 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CDC7O00311 574 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 TRAFD1O14545 582 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 BET1O15155 118 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ST8SIA3O43173 380 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ANGPTL1O95841 491 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 SAT1P21673 171 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CCNOP22674 350 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 NDUFS1P28331 727 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 S100GP29377 79 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PRDX6P30041 224 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MC4RP32245 332 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MAGEA6P43360 314 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CLCNKBP51801 687 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 DGKEP52429 567 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CDKL1Q00532 357 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 SLC34A1Q06495 639 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ZNF616Q08AN1 781 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RUNX2Q13950 521 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RCAN2Q14206 197 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 XKR4Q5GH76 650 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CREB3L2Q70SY1 520 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 P4HA3Q7Z4N8 544 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MCOLN2Q8IZK6 566 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ADGRG2Q8IZP9 1017 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 FAM98AQ8NCA5 519 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ST6GALNAC3Q8NDV1 305 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MAFAQ8NHW3 353 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 APBB2Q92870 758 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CPNE4Q96A23 557 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CCDC124Q96CT7 223 aaKnown RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CNBD2Q96M20 576 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 KLHDC3Q9BQ90 382 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 OPN4Q9UHM6 478 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 EMSYQ7Z589 1322 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 FAM83GA6ND36 823 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 KLRF2D3W0D1 207 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RGS16O15492 202 aaPredicted RBP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 KCNAB3O43448 404 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RFPL1O75677 317 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 EIF3GO75821 320 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ZFPL1O95159 310 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 H2AFB2P0C5Z0 115 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 ZSCAN5DPP0CG00 497 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 PCSK6P29122 969 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MAGEA2P43356 314 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 TM4SF4P48230 202 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 EMP3P54852 163 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 CXCR4P61073 352 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 MGAT3Q09327 533 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RABGAP1LQ5R372 815 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 WASHC2DQ5SRD0 308 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 RAET1LQ5VY80 246 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 NCR3LG1Q68D85 454 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 WBP2NLQ6ICG8 309 aa5.25□□□□□ -1.57
PTPN4-203ENST00000430976 TAS1R1Q7RTX1 841 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms