RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 NCCRP1Q6ZVX7 275 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 RPS27LQ71UM5 84 aaKnown RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 SNX20Q7Z614 316 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 SLC37A3Q8NCC5 494 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 SPPL2BQ8TCT7 592 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 IFT27Q9BW83 186 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 NUSAP1Q9BXS6 441 aaKnown RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 TRIM2Q9C040 744 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 FKBP14Q9NWM8 211 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 RPL36Q9Y3U8 105 aaKnown RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 FXYD6-FXYD2A0A087WZ82 144 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 LOC100130705A0A1B0GUX0 176 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 H3BNH8 94 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 PITPNM1O00562 1244 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 FOXD2O60548 495 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 PAPSS2O95340 614 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-204ENST00000428026 ERVK-8P63133 956 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 ATAT1Q5SQI0 421 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 TMEM236Q5W0B7 351 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 ALKBH2Q6NS38 261 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 MARCH9Q86YJ5 346 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 HID1Q8IV36 788 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 CEP76Q8TAP6 659 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 TMEM74Q96NL1 305 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 FXYD6Q9H0Q3 95 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 TCF7L1Q9HCS4 588 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 HSPB11Q9Y547 144 aa14.19□□□□□ -0.14
PTPRU-204ENST00000428026 APOC1P02654 83 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 FCER2P06734 321 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 TACR2P21452 398 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 SEMG2Q02383 582 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CBLBQ13191 982 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 FAM124AQ86V42 546 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CFAP206Q8IYR0 622 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 LGI4Q8N135 537 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 OR2L3Q8NG85 312 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 SEC14L1Q92503 715 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 ITFG2Q969R8 447 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 DUSP26Q9BV47 211 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 SLC27A6Q9Y2P4 619 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 RGPD5Q99666 1765 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 INMTO95050 263 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CSF2P04141 144 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 ACSL1P33121 698 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 HERVK_113P63132 956 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 MSS51Q4VC12 460 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 KLHL22Q53GT1 634 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 FAAH2Q6GMR7 532 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CYP2U1Q7Z449 544 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 OR4C6Q8NH72 309 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 ERVK-6Q9BXR3 956 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 FCF1Q9Y324 198 aaKnown RBP14.18□□□□□ -0.14
PTPRU-204ENST00000428026 GSK3BP49841 420 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 EEFSECP57772 596 aaKnown RBP14.18□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF792Q3KQV3 632 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 FAM129CQ86XR2 697 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 DNAJA4Q8WW22 397 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-204ENST00000428026 MIR1-1HGQ9H1L0 117 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 UPB1Q9UBR1 384 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CHP2O43745 196 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 PITPNAQ00169 270 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 RHDQ02161 417 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CERS6Q6ZMG9 384 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 CAND1Q86VP6 1230 aaKnown RBP14.18□□□□□ -0.14
PTPRU-204ENST00000428026 IQCHQ86VS3 1027 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 SLC35B2Q8TB61 432 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 WACQ9BTA9 647 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 RDH8Q9NYR8 311 aa14.18□□□□□ -0.14
PTPRU-204ENST00000428026 KIAA1522Q9P206 1035 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-204ENST00000428026 A8MT66 165 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 C9IYK1 514 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PDPK1O15530 556 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CFHP08603 1231 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 IMPDH1P20839 514 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 XKP51811 444 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 GJA9P57773 515 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 TMED9Q9BVK6 235 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 BEX2Q9BXY8 128 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 BEX1Q9HBH7 125 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 TTC24A2A3L6 582 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 SLC35F4A4IF30 521 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CLCN4P51793 760 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF267Q14586 743 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 UGT8Q16880 541 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 TOMM5Q8N4H5 51 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PACRGLQ8N7B6 248 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 TSPAN18Q96SJ8 248 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CFAP97Q9P2B7 532 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 IGSF9Q9P2J2 1179 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ZFP37Q9Y6Q3 630 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 OR1F1O43749 312 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 MATN4O95460 622 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 LMO2P25791 158 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 DNAJA1P31689 397 aaKnown RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 L1CAMP32004 1257 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PRAMEF17Q5VTA0 474 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PRSS55Q6UWB4 352 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 SPAG16Q8N0X2 631 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms