RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CNOT3O75175 753 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 PIM1P11309 404 aaPredicted RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 VARSP26640 1264 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 TERF1P54274 439 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 EIF3BP55884 814 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 GRB7Q14451 532 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 FCRL6Q6DN72 434 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 MRPL14Q6P1L8 145 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 LRRC6Q86X45 466 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 TTC29Q8NA56 475 aaPredicted RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 Q8NA96 180 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 MAIP1Q8WWC4 291 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 RAD51AP1Q96B01 352 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 FOPNLQ96NB1 174 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 MENTQ9BUN1 341 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 RAB11FIP5Q9BXF6 653 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 SLC29A3Q9BZD2 475 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 ATP13A2Q9NQ11 1180 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 LZTFL1Q9NQ48 299 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 EIF2B3Q9NR50 452 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 TREX1Q9NSU2 369 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
LINC01006-202ENST00000418309 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
LINC01006-202ENST00000418309 A0A1B0GX78 115 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 VAPBO95292 243 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 C1orf105O95561 183 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 FGGP02679 453 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 UMODP07911 640 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MCM3P25205 808 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MGAT1P26572 445 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 FMO4P31512 558 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 BDKRB1P46663 353 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 KCNJ1P48048 391 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 GRM7Q14831 915 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 SIX1Q15475 284 aaPredicted RBP13.56□□□□□ -0.24
LINC01006-202ENST00000418309 PLEKHN1Q494U1 663 aaPredicted RBP13.56□□□□□ -0.24
LINC01006-202ENST00000418309 TCTE1Q5JU00 501 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 DRICH1Q6PGQ1 229 aaPredicted RBP13.56□□□□□ -0.24
LINC01006-202ENST00000418309 CNSTQ6PJW8 725 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 CES3Q6UWW8 571 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 OVCH1Q7RTY7 1134 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 TMEM151BQ8IW70 566 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MPP5Q8N3R9 675 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 ZUFSPQ96AP4 578 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MIPEPQ99797 713 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 SELENOSQ9BQE4 189 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 SLC22A11Q9NSA0 550 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 CUTCQ9NTM9 273 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 RUVBL2Q9Y230 463 aaKnown RBP13.56□□□□□ -0.24
LINC01006-202ENST00000418309 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 MAST4O15021 2626 aa13.56□□□□□ -0.24
LINC01006-202ENST00000418309 LRRK2Q5S007 2527 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 TCP11X1B4DZS4 312 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 GOLGA8KD6RF30 607 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 GOLGA8TH3BQL2 631 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 AGPSO00116 658 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 DSCR3O14972 297 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 PFDN6O15212 129 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ITGA3P26006 1051 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 VSX2P58304 361 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 MRPL49Q13405 166 aaKnown RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 EIF2S3LQ2VIR3 472 aaKnown RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 FAM214AQ32MH5 1076 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 YOD1Q5VVQ6 348 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ZADH2Q8N4Q0 377 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 CISD2Q8N5K1 135 aaKnown RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 METTL27Q8N6F8 245 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 PRR7Q8TB68 274 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 MAGEC3Q8TD91 643 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 TM9SF4Q92544 642 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 FAM136AQ96C01 138 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 MFSD3Q96ES6 412 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ILKAPQ9H0C8 392 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ZNF552Q9H707 407 aaPredicted RBP13.55□□□□□ -0.24
LINC01006-202ENST00000418309 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 B3GNT3Q9Y2A9 372 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
LINC01006-202ENST00000418309 KRT87PA6NCN2 255 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 CEP104O60308 925 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 SEMA7AO75326 666 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 FKBP9O95302 570 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 ALBP02768 609 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
LINC01006-202ENST00000418309 CHRM3P20309 590 aa13.54□□□□□ -0.24
LINC01006-202ENST00000418309 ITGAXP20702 1163 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms