RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FBXO6Q9NRD1 293 aaPredicted RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 IARS2Q9NSE4 1012 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 G3BP2Q9UN86 482 aaKnown RBP17.38■□□□□ 0.37
VCP-202ENST00000417448 SNX7Q9UNH6 387 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 B3GNT3Q9Y2A9 372 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 CRYL1Q9Y2S2 319 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 FAM169AQ9Y6X4 670 aa17.38■□□□□ 0.37
VCP-202ENST00000417448 LRRTM2O43300 516 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 CPNE3O75131 537 aaKnown RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 USP1O94782 785 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 PGAM1P18669 254 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 PDHA2P29803 388 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 EIF3BP55884 814 aaKnown RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 THOC5Q13769 683 aaKnown RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 CRYMQ14894 314 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 LONRF1Q17RB8 773 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 HSP90AA5PQ58FG0 334 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 LYPLAL1Q5VWZ2 237 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 METRNLQ641Q3 311 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 UNC5AQ6ZN44 842 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 CENPUQ71F23 418 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 ZBTB2Q8N680 514 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
VCP-202ENST00000417448 OR2L2Q8NH16 312 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 HEXDCQ8WVB3 486 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 SGSM3Q96HU1 749 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 ZNF514Q96K75 400 aaPredicted RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 INSM2Q96T92 566 aaPredicted RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 RAB33BQ9H082 229 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 SAYSD1Q9NPB0 183 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 WASH6PQ9NQA3 447 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 FGF21Q9NSA1 209 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 TEX264Q9Y6I9 313 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 DNMT3AQ9Y6K1 912 aaPredicted RBP17.37■□□□□ 0.37
VCP-202ENST00000417448 CCDC88CQ9P219 2028 aa17.37■□□□□ 0.37
VCP-202ENST00000417448 PKDREJQ9NTG1 2253 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 ZG16O60844 167 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 VCLP18206 1134 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 PAMP19021 973 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 MPP1Q00013 466 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 ATP1A4Q13733 1029 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 ZNF658BQ4V348 819 aaPredicted RBP17.36■□□□□ 0.37
VCP-202ENST00000417448 ZNF470Q6ECI4 717 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 TRMT10BQ6PF06 316 aaKnown RBP17.36■□□□□ 0.37
VCP-202ENST00000417448 PACS1Q6VY07 963 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 CCDC25Q86WR0 208 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 TMEM102Q8N9M5 508 aaPredicted RBP17.36■□□□□ 0.37
VCP-202ENST00000417448 FBXO36Q8NEA4 188 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 GPR150Q8NGU9 434 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 FBXO25Q8TCJ0 367 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 ELMO1Q92556 727 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 UBXN4Q92575 508 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 RMDN2Q96LZ7 410 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 NRTNQ99748 197 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 RAB17Q9H0T7 212 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 POT1Q9NUX5 634 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 GALPQ9UBC7 116 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 ZC3H7BQ9UGR2 993 aaKnown RBP17.36■□□□□ 0.37
VCP-202ENST00000417448 TSR3Q9UJK0 312 aaKnown RBP17.36■□□□□ 0.37
VCP-202ENST00000417448 TCFL5Q9UL49 500 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 SEC16AO15027 2179 aa17.36■□□□□ 0.37
VCP-202ENST00000417448 FER1L5A0AVI2 2057 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 PRSS44E7EML9 344 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 SCRG1O75711 98 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 PIAS1O75925 651 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 AP2A2O94973 939 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 S1PR4O95977 384 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 CAPN1P07384 714 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 OR56A5P0C7T3 313 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 SLC1A2P43004 574 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 CARSP49589 748 aaKnown RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 TTPAP49638 278 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 ACY1Q03154 408 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 DMPKQ09013 629 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 TUBB2AQ13885 445 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 BOP1Q14137 746 aaKnown RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 RPE65Q16518 533 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 ZXDCQ2QGD7 858 aaPredicted RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 CTSL3PQ5NE16 218 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 VWA5B1Q5TIE3 1220 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 PRAMEF17Q5VTA0 474 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 PTRHD1Q6GMV3 140 aaKnown RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 MRNIPQ6NTE8 343 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 ABRAXAS1Q6UWZ7 409 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 MED25Q71SY5 747 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 SDCCAG8Q86SQ7 713 aaPredicted RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 KCNMB4Q86W47 210 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 BPHLQ86WA6 291 aaPredicted RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 CILP2Q8IUL8 1156 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 ZBED8Q8IZ13 594 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 BBOF1Q8ND07 529 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 ST6GALNAC3Q8NDV1 305 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 PHC3Q8NDX5 983 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 LPGAT1Q92604 370 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 LINC00615Q96LM1 132 aaPredicted RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 TTC1Q99614 292 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 MAP3K3Q99759 626 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 TUBB2BQ9BVA1 445 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 P2RY12Q9H244 342 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms