RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PIKFYVEQ9Y2I7 2098 aa13.85□□□□□ -0.19
PAF1-202ENST00000416728 RASGRF2O14827 1237 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 DSCR3O14972 297 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 SLCO2B1O94956 709 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 CBX6O95503 412 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 ALBP02768 609 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 ITGAXP20702 1163 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 AOAHP28039 575 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 GRIA3P42263 894 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 TTPAP49638 278 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 SNX1Q13596 522 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 GRB7Q14451 532 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 TCTE1Q5JU00 501 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 IRAK1BP1Q5VVH5 260 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 YOD1Q5VVQ6 348 aaPredicted RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 FIGLAQ6QHK4 219 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 Q6ZS92 163 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 PRUNE1Q86TP1 453 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 TTC29Q8NA56 475 aaPredicted RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 C1orf54Q8WWF1 131 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 PANX3Q96QZ0 392 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 SELENOSQ9BQE4 189 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 RBSNQ9H1K0 784 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 MRM3Q9HC36 420 aaKnown RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 ZBTB20Q9HC78 741 aaPredicted RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 CUTCQ9NTM9 273 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 PAK5Q9P286 719 aa13.84□□□□□ -0.19
PAF1-202ENST00000416728 MARCH4Q9P2E8 410 aaPredicted RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 NXT1Q9UKK6 140 aaKnown RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 COPG1Q9Y678 874 aaKnown RBP13.84□□□□□ -0.19
PAF1-202ENST00000416728 ANKUB1A6NFN9 424 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 FKBP9O95302 570 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 ONECUT2O95948 504 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 ETS1P14921 441 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 MCM3P25205 808 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 GLRBP48167 497 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 ELOAQ14241 798 aaKnown RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 NKG7Q16617 165 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 PCID2Q5JVF3 399 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 PRAMEF13Q5VWM6 474 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 FCRL6Q6DN72 434 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 SKA2Q8WVK7 121 aaPredicted RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 INPP5DQ92835 1189 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 RAD51AP1Q96B01 352 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 SPSB2Q99619 263 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 SLC26A1Q9H2B4 701 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 ERRFI1Q9UJM3 462 aaPredicted RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 TTC7AQ9ULT0 858 aaPredicted RBP13.83□□□□□ -0.19
PAF1-202ENST00000416728 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 MRFAP1Q9Y605 127 aa13.83□□□□□ -0.19
PAF1-202ENST00000416728 TARM1B6A8C7 271 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 KPNA5O15131 536 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 CD3EAPO15446 510 aaKnown RBP13.83□□□□□ -0.2
PAF1-202ENST00000416728 ALOX12BO75342 701 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
PAF1-202ENST00000416728 FAM214AQ32MH5 1076 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 SHISA6Q6ZSJ9 500 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 COX15Q7KZN9 410 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 OTOAQ7RTW8 1153 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 MAMDC2Q7Z304 686 aaPredicted RBP13.83□□□□□ -0.2
PAF1-202ENST00000416728 CUZD1Q86UP6 607 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 MPP5Q8N3R9 675 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.83□□□□□ -0.2
PAF1-202ENST00000416728 ZUFSPQ96AP4 578 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 VPS50Q96JG6 964 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 C5orf34Q96MH7 638 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 SOX17Q9H6I2 414 aaPredicted RBP13.83□□□□□ -0.2
PAF1-202ENST00000416728 AGPAT4Q9NRZ5 378 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 IL1RAPL1Q9NZN1 696 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 CTSFQ9UBX1 484 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 SLC5A6Q9Y289 635 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 HS3ST3B1Q9Y662 390 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 FAM169AQ9Y6X4 670 aa13.83□□□□□ -0.2
PAF1-202ENST00000416728 NOTCH2Q04721 2471 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 FER1L5A0AVI2 2057 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 SOCS6O14544 535 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 PRICKLE3O43900 615 aaPredicted RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 SRPX2O60687 465 aaPredicted RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 NDUFS3O75489 264 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 C1orf105O95561 183 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 LDLRP01130 860 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 ZSCAN5DPP0CG00 497 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 BDKRB1P46663 353 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 OR1D4P47884 311 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 VSX2P58304 361 aaPredicted RBP13.82□□□□□ -0.2
PAF1-202ENST00000416728 CRADDP78560 199 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 RBBP7Q16576 425 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 TUBB8Q3ZCM7 444 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 CRB2Q5IJ48 1285 aa13.82□□□□□ -0.2
PAF1-202ENST00000416728 AGAP7PQ5VUJ5 663 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms