RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 ZNF597Q96LX8 424 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 ZSWIM3Q96MP5 696 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 UGT2B28Q9BY64 529 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 ABCG8Q9H221 673 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 SFXN1Q9H9B4 322 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 GPRC5BQ9NZH0 403 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 AURKCQ9UQB9 309 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 NCOR2Q9Y618 2525 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 DNAH14Q0VDD8 3507 aa13.14□□□□□ -0.31
SSR4P1-201ENST00000415143 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 INPP4BO15327 924 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PSIP1O75475 530 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PAPLNO95428 1278 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 ANXA6P08133 673 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 ATP6V1B2P21281 511 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FSHRP23945 695 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 IL12AP29459 219 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 S100A3P33764 101 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 HALP42357 657 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 ZFP36L2P47974 494 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PRLHRP49683 370 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CLDN8P56748 225 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 IRF8Q02556 426 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 DLX2Q07687 328 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PCDH1Q08174 1060 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FXNQ16595 210 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PTCHD3Q3KNS1 767 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 BCL7AQ4VC05 210 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FAM98BQ52LJ0 330 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 TMTC4Q5T4D3 741 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FRG2Q64ET8 278 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 GLYATQ6IB77 296 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 SLC2A7Q6PXP3 512 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 IFNEQ86WN2 208 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 GALNT4Q8N4A0 578 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FBXO15Q8NCQ5 510 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PAPD5Q8NDF8 572 aaKnown RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CANT1Q8WVQ1 401 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 SCAMP4Q969E2 229 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 HAUS8Q9BT25 410 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 BDH2Q9BUT1 245 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 CLMPQ9H6B4 373 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 COQ10BQ9H8M1 238 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 GDE1Q9NZC3 331 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 TMPRSS11EQ9UL52 423 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 PADI4Q9UM07 663 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 HCFC2Q9Y5Z7 792 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
SSR4P1-201ENST00000415143 ZFHX4Q86UP3 3567 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 ASPDHA6ND91 283 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SCELO95171 688 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 LDLRP01130 860 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 PDYNP01213 254 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 PGRP06401 933 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 ZCCHC18P0CG32 403 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CDH1P12830 882 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 ZNF26P17031 533 aaPredicted RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 PRPS1L1P21108 318 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SRSF11Q05519 484 aaKnown RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SIGLEC14Q08ET2 396 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 ABRQ12979 859 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CHIT1Q13231 466 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 TMEM52BQ4KMG9 183 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 ATG9BQ674R7 924 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 TMEM220Q6QAJ8 160 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 RFLNAQ6ZTI6 216 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 TMEM132CQ8N3T6 1108 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CPA6Q8N4T0 437 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SUSD6Q92537 303 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 SLCO4A1Q96BD0 722 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 TESCQ96BS2 214 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 DTD2Q96FN9 168 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 TEX37Q96LM6 180 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 COQ10AQ96MF6 247 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CCDC115Q96NT0 180 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 OR52E6Q96RD3 313 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 MRPS26Q9BYN8 205 aaKnown RBP13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
SSR4P1-201ENST00000415143 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms