RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PAX3P23760 479 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 GATA2P23769 480 aaPredicted RBP4.41□□□□□ -1.7
ATG4C-204ENST00000414558 CLNS1AP54105 237 aaKnown RBP4.41□□□□□ -1.7
ATG4C-204ENST00000414558 EPS8Q12929 822 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 TAF10Q12962 218 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 RIGQ13278 110 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 FASTKD3Q14CZ7 662 aaKnown RBP4.41□□□□□ -1.7
ATG4C-204ENST00000414558 HERC3Q15034 1050 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 C11orf63Q6NUN7 778 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 BTN2A1Q7KYR7 527 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 ERC1Q8IUD2 1116 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 PRSS33Q8NF86 280 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 SLAMF9Q96A28 289 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 ARSGQ96EG1 525 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 MRPL1Q9BYD6 325 aaKnown RBP4.41□□□□□ -1.7
ATG4C-204ENST00000414558 PANK2Q9BZ23 570 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 SHARPINQ9H0F6 387 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 SPHK2Q9NRA0 654 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 PANK4Q9NVE7 773 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 VPS28Q9UK41 221 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 PPP2R2CQ9Y2T4 447 aa4.41□□□□□ -1.7
ATG4C-204ENST00000414558 SOCS3O14543 225 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 SLC2A2P11168 524 aaPredicted RBP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 CSTF2P33240 577 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 GUCY2DQ02846 1103 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 ZNF415Q09FC8 603 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 NFATC2Q13469 925 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 WTAPQ15007 396 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 CA9Q16790 459 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 SYT14P1Q58G82 188 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 SLC35D3Q5M8T2 416 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 CDC20BQ86Y33 519 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 LMNTD2Q8IXW0 634 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 OR1L3Q8NH93 324 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 ZNF622Q969S3 477 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 NSUN4Q96CB9 384 aaKnown RBP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 CALML4Q96GE6 196 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 SFXN2Q96NB2 322 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 THAP2Q9H0W7 228 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 OPA3Q9H6K4 179 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 TRPV4Q9HBA0 871 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 TEX10Q9NXF1 929 aaPredicted RBP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 THEGQ9P2T0 379 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 C19orf25Q9UFG5 118 aaPredicted RBP4.4□□□□□ -1.71
ATG4C-204ENST00000414558 MAN1B1Q9UKM7 699 aa4.4□□□□□ -1.71
ATG4C-204ENST00000414558 FEZF1A0PJY2 475 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 SERINC4A6NH21 518 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 ALOX12P18054 663 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 PRKACGP22612 351 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 JAK1P23458 1154 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 PTPN3P26045 913 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 MAT1AQ00266 395 aaKnown RBP4.39□□□□□ -1.71
ATG4C-204ENST00000414558 MINDY1Q8N5J2 469 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 OR10S1Q8NGN2 331 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 GATAD1Q8WUU5 269 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 JAKMIP2Q96AA8 810 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 CENPTQ96BT3 561 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 SPACA9Q96E40 222 aaPredicted RBP4.39□□□□□ -1.71
ATG4C-204ENST00000414558 SPDL1Q96EA4 605 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 FOXN4Q96NZ1 517 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 NKX3-1Q99801 234 aaPredicted RBP4.39□□□□□ -1.71
ATG4C-204ENST00000414558 PANK3Q9H999 370 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 BLOC1S4Q9NUP1 217 aa4.39□□□□□ -1.71
ATG4C-204ENST00000414558 ADD3Q9UEY8 706 aaKnown RBP4.39□□□□□ -1.71
ATG4C-204ENST00000414558 IGHV3OR16-10A0A075B7F0 116 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 MPTX1A8MV57 137 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 IDH3BO43837 385 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 DANCRP0C864 163 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 LHCGRP22888 699 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 CDH13P55290 713 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 GEMIN4P57678 1058 aaKnown RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 MOGAT2Q3SYC2 334 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 FAM205BPQ63HN1 556 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 ZNF774Q6NX45 483 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 TMPRSS11BQ86T26 416 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 APPL2Q8NEU8 664 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 OR2L2Q8NH16 312 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 PRPF31Q8WWY3 499 aaKnown RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 ZNF486Q96H40 463 aaPredicted RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 NECTIN4Q96NY8 510 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 SEPHS2Q99611 448 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 BARD1Q99728 777 aaKnown RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 SDF4Q9BRK5 362 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 TRIM6Q9C030 488 aaPredicted RBP4.38□□□□□ -1.71
ATG4C-204ENST00000414558 MTMR12Q9C0I1 747 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 MED20Q9H944 212 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 Q9N2K0 584 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 TBC1D22BQ9NU19 505 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 TBC1D29Q9UFV1 150 aa4.38□□□□□ -1.71
ATG4C-204ENST00000414558 A0A1W2PR80 420 aa4.37□□□□□ -1.71
ATG4C-204ENST00000414558 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
ATG4C-204ENST00000414558 ENTPD3O75355 529 aa4.37□□□□□ -1.71
ATG4C-204ENST00000414558 TOMM70O94826 608 aa4.37□□□□□ -1.71
ATG4C-204ENST00000414558 DDHD2O94830 711 aa4.37□□□□□ -1.71
ATG4C-204ENST00000414558 C22orf31O95567 290 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms