RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CARSP49589 748 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CLK3P49761 638 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CCNG1P51959 295 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 JAK3P52333 1124 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SLC5A3P53794 718 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 IST1P53990 364 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 UCP2P55851 309 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GFRA1P56159 465 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NRG3P56975 720 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NUP107P57740 925 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DAOAP59103 153 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RPL23AP62750 156 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NKX6-1P78426 367 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 B4GALNT1Q00973 533 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SP2Q02086 613 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SPP2Q13103 211 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NFYCQ13952 458 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MVPQ14764 893 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PON3Q15166 354 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TESK1Q15569 626 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 EZH2Q15910 746 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FSCN1Q16658 493 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 BMT2Q1RMZ1 405 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 BTBD16Q32M84 506 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ACTBL2Q562R1 376 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PDZK1Q5T2W1 519 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 BSPRYQ5W0U4 402 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 E4F1Q66K89 784 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OR6B2Q6IFH4 312 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF530Q6P9A1 599 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CCDC137Q6PK04 289 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NHLRC1Q6VVB1 395 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FRMD7Q6ZUT3 714 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TAS1R1Q7RTX1 841 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OVCH1Q7RTY7 1134 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ADCK2Q7Z695 626 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RTN4RL2Q86UN3 420 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF410Q86VK4 478 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TRIM69Q86WT6 500 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NRROSQ86YC3 692 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 C1orf210Q8IVY1 113 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DHX40Q8IX18 779 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CDK20Q8IZL9 346 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FAM185AQ8N0U4 392 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CLYBLQ8N0X4 340 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ELMOD1Q8N336 334 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CPSF7Q8N684 471 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 LINC00482Q8N8I6 264 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ATP6V0D2Q8N8Y2 350 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 C12orf29Q8N999 325 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TTC29Q8NA56 475 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TMEM104Q8NE00 496 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DBF4BQ8NFT6 615 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OR7D4Q8NG98 312 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OR4C15Q8NGM1 316 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OR10T2Q8NGX3 314 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GRAPLQ8TC17 118 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 BRIX1Q8TDN6 353 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GLYATL2Q8WU03 294 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RASSF5Q8WWW0 418 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZCCHC14Q8WYQ9 949 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RSC1A1Q92681 617 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MCUR1Q96AQ8 359 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RGMAQ96B86 450 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TMCO6Q96DC7 493 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PEX11GQ96HA9 241 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 C9orf72Q96LT7 481 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 LRFN5Q96NI6 719 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PCDHB18PQ96TA0 734 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PARK7Q99497 189 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CHP1Q99653 195 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GPA33Q99795 319 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CTRCQ99895 268 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DPYSL5Q9BPU6 564 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FDXACB1Q9BRP7 624 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PELOQ9BRX2 385 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PHF7Q9BWX1 381 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MAGEB5Q9BZ81 275 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 OSBPL8Q9BZF1 889 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SEMA4CQ9C0C4 833 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 HOXD1Q9GZZ0 328 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MIS12Q9H081 205 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MMP27Q9H306 513 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PDZD7Q9H5P4 517 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 KAT14Q9H8E8 782 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ARMT1Q9H993 441 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FN3KRPQ9HA64 309 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 EBF2Q9HAK2 575 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ASCL3Q9NQ33 180 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF302Q9NR11 478 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PNO1Q9NRX1 252 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SETD4Q9NVD3 440 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PAG1Q9NWQ8 432 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PARPBPQ9NWS1 579 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GID8Q9NWU2 228 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CLEC5AQ9NY25 188 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GRHL1Q9NZI5 618 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PDP1Q9P0J1 537 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms