RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SYT10Q6XYQ8 523 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 TTLL10Q6ZVT0 673 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 MICALCLQ6ZW33 695 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 CDH24Q86UP0 819 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 FAM20CQ8IXL6 584 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 ZNF567Q8N184 647 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 SLC35F6Q8N357 371 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 OR13C4Q8NGS5 318 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 TFB1MQ8WVM0 346 aaKnown RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 NAPGQ99747 312 aaPredicted RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 GORASP1Q9BQQ3 440 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 FSD1LQ9BXM9 530 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 MAK16Q9BXY0 300 aaKnown RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 GOLPH3Q9H4A6 298 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 SOX17Q9H6I2 414 aaPredicted RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 VPS37BQ9H9H4 285 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 EURLQ9NYK6 297 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 OR6C2Q9NZP2 312 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 SAE1Q9UBE0 346 aaPredicted RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 SH3BGRL2Q9UJC5 107 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 NXT1Q9UKK6 140 aaKnown RBP9.16□□□□□ -0.94
RFFL-203ENST00000413582 AMFRQ9UKV5 643 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 HYOU1Q9Y4L1 999 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 ALG6Q9Y672 507 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 CAPN6Q9Y6Q1 641 aa9.16□□□□□ -0.94
RFFL-203ENST00000413582 ACANP16112 2415 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 TRAV17A0A0B4J275 112 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 DYTNA2CJ06 578 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 VSTM2BA6NLU5 285 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 C2orf81A6NN90 581 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 C19orf84I3L1E1 186 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 DSCR3O14972 297 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 HPP00738 406 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 AGTP01019 485 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 TCP1P17987 556 aaKnown RBP9.15□□□□□ -0.94
RFFL-203ENST00000413582 ITGALP20701 1170 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 MAGP20916 626 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 ALAS2P22557 587 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 MST1P26927 711 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 NR2C2P49116 596 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 ARSFP54793 590 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 CDSNQ15517 529 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.15□□□□□ -0.94
RFFL-203ENST00000413582 LRRC38Q5VT99 294 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 PEX26Q7Z412 305 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 SNX20Q7Z614 316 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 HEXDCQ8WVB3 486 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 PSMF1Q92530 271 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 VAT1Q99536 393 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 FICDQ9BVA6 458 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 FAM96AQ9H5X1 160 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 ZNF160Q9HCG1 818 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 SEMA3GQ9NS98 782 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 CUTCQ9NTM9 273 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 PLA2G3Q9NZ20 509 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 ABI3Q9P2A4 366 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 RNF14Q9UBS8 474 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 PLAGL1Q9UM63 463 aa9.15□□□□□ -0.94
RFFL-203ENST00000413582 GTF3C1Q12789 2109 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 NIPBLQ6KC79 2804 aaeCLIP9.14□□□□□ -0.95
RFFL-203ENST00000413582 TRBV5-4A0A0C4DH59 114 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 C5orf60A6NFR6 353 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 CCL22O00626 93 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 MAP2K7O14733 419 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 SPOPO43791 374 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 DIAPH2O60879 1101 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 USP1O94782 785 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 PIM1P11309 404 aaPredicted RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 ACPPP15309 386 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 CAPN3P20807 821 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 AGAP20933 346 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 MCM3P25205 808 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ACRV1P26436 265 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ACADLP28330 430 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ADRA1AP35348 466 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 CDKN1CP49918 316 aaPredicted RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 SRSF11Q05519 484 aaKnown RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 MSLNQ13421 630 aaPredicted RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 OLIG2Q13516 323 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 KIR2DS3Q14952 304 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 RPS6KA1Q15418 735 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 XKRXQ6PP77 449 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 MFSD7Q6UXD7 560 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 NLRP9Q7RTR0 991 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 PID1Q7Z2X4 250 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 MCATQ8IVS2 390 aaKnown RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 TBC1D21Q8IYX1 336 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 CLDN19Q8N6F1 224 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 METTL27Q8N6F8 245 aaPredicted RBP9.14□□□□□ -0.95
RFFL-203ENST00000413582 OR5K2Q8NHB8 316 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 DENND1AQ8TEH3 1009 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 C8orf44Q96CB5 159 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 C14orf79Q96F83 325 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 HES6Q96HZ4 224 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 VPS50Q96JG6 964 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 ZNF285Q96NJ3 590 aa9.14□□□□□ -0.95
RFFL-203ENST00000413582 QKIQ96PU8 341 aaKnown RBP eCLIP9.14□□□□□ -0.953e-7■■■□□ 14.7
RFFL-203ENST00000413582 CRB3Q9BUF7 120 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms