RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 FBXO32Q969P5 355 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 TSGA13Q96PP4 275 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 SLAMF8Q9P0V8 285 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 SLC9A8Q9Y2E8 581 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 KCTD3Q9Y597 815 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 MAGEB17A8MXT2 336 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 OR10H3O60404 316 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 CCNB2O95067 398 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 DNTTP04053 509 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 UQCRC1P31930 480 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 GPR15P49685 360 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 CCDC58Q4VC31 144 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 CNTN4Q8IWV2 1026 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 KCTD13Q8WZ19 329 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 SIPA1Q96FS4 1042 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 POFUT2Q9Y2G5 429 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 PPP6CO00743 305 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 S1PR4O95977 384 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 STSP08842 583 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 UGT2B15P54855 530 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 FCGRTP55899 365 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 PTGR1Q14914 329 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 OR4D1Q15615 310 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 SYTL3Q4VX76 610 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 SIRPB2Q5JXA9 342 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 C11orf65Q8NCR3 313 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 TOR1AIP2Q8NFQ8 470 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 OR4F6Q8NGB9 312 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 OR10T2Q8NGX3 314 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 HSH2DQ96JZ2 352 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 POPDC3Q9HBV1 291 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
CLTCL1-201ENST00000412649 PAPPAQ13219 1627 aa13.58□□□□□ -0.23
CLTCL1-201ENST00000412649 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 EIF3FO00303 357 aaPredicted RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 SCAMP3O14828 347 aaKnown RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 JRKO75564 520 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 VIPP01282 170 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 ZNF431Q8TF32 576 aaPredicted RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 SGCDQ92629 289 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 MGLLQ99685 303 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 UCK2Q9BZX2 261 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 SMPD4Q9NXE4 827 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 TLL1O43897 1013 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 CDRT1O95170 752 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 ITGAMP11215 1152 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 PIGAP37287 484 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 LILRA4P59901 499 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 DSC3Q14574 896 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 GNASQ5JWF2 1037 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 SLX4IPQ5VYV7 408 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 PTERQ96BW5 349 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 HMCESQ96FZ2 354 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 IFNA16P05015 189 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 RHOCP08134 193 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 IRF8Q02556 426 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 MAD2L1BPQ15013 274 aaPredicted RBP13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 LGI4Q8N135 537 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 EXOC2Q96KP1 924 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 MRGPRX2Q96LB1 330 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 ZNF382Q96SR6 550 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 TCF25Q9BQ70 676 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 MMP28Q9H239 520 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 MAT2BQ9NZL9 334 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
CLTCL1-201ENST00000412649 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 CLIC1O00299 241 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 C22orf31O95567 290 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 SLC11A2P49281 568 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 PCYT2Q99447 389 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 ATP13A1Q9HD20 1204 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 MRPL39Q9NYK5 338 aaKnown RBP13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 NIPSNAP2O75323 286 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 CLDN9O95484 217 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 CTSHP09668 335 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 NAT1P18440 290 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 SYT6Q5T7P8 510 aaPredicted RBP13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 IKBIPQ70UQ0 350 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 PCED1BQ96HM7 432 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 OR51E2Q9H255 320 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 GORASP2Q9H8Y8 452 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 ABCB8Q9NUT2 735 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 ANGPT4Q9Y264 503 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 MRPS7Q9Y2R9 242 aaKnown RBP13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 GRXCR2A6NFK2 248 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 RETP07949 1114 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 BMP1P13497 986 aa13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 NFE2Q16621 373 aaPredicted RBP13.57□□□□□ -0.24
CLTCL1-201ENST00000412649 CRTC2Q53ET0 693 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms