RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MAPK13O15264 365 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 B4GALT5O43286 388 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CALUO43852 315 aaPredicted RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 FAM189A1O60320 539 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CD4P01730 458 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 NR3C1P04150 777 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 UMODP07911 640 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 DARSP14868 501 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 CAPN2P17655 700 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 NR2F2P24468 414 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TMOD1P28289 359 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 SSTR2P30874 369 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 KRT9P35527 623 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 BSGP35613 385 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TSPAN7P41732 249 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CASP4P49662 377 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 NLRP11P59045 1033 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 MPP1Q00013 466 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 FKBP3Q00688 224 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 ILF3Q12906 894 aaKnown RBP eCLIP4.23□□□□□ -1.731e-7■■■■■ 26.8
CLK1-203ENST00000409769 TFDP1Q14186 410 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 PTGISQ16647 500 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ALG11Q2TAA5 492 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 MMEL1Q495T6 779 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TCP11X2Q5H9J9 407 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 FAM76BQ5HYJ3 339 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 RHBDF2Q6PJF5 856 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 B3GNT6Q6ZMB0 384 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 QSOX2Q6ZRP7 698 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TAOK1Q7L7X3 1001 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 FOXRED2Q8IWF2 684 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 NME8Q8N427 588 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 RFLNBQ8N5W9 214 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CSGALNACT2Q8N6G5 542 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 GOLGA5Q8TBA6 731 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 METTL6Q8TCB7 284 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CREB3L4Q8TEY5 395 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 DNAJB3Q8WWF6 145 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 FAM149B1Q96BN6 582 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 MTBPQ96DY7 904 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 IGSF21Q96ID5 467 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ADGRG7Q96K78 797 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ACCSQ96QU6 501 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 OR1F2PQ96R84 312 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TSG101Q99816 390 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CBWD1Q9BRT8 395 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 IFIH1Q9BYX4 1025 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 PDCL3Q9H2J4 239 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 MMP25Q9NPA2 562 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 LTB4R2Q9NPC1 389 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 SLC6A13Q9NSD5 602 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ZNF224Q9NZL3 707 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 LIMA1Q9UHB6 759 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 EXOC7Q9UPT5 735 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ERVK-11Q9UQG0 969 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CAMK2AQ9UQM7 478 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 AAR2Q9Y312 384 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 CEPT1Q9Y6K0 416 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 CAPN7Q9Y6W3 813 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 LTBP2Q14767 1821 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 TDRD15B5MCY1 1934 aaKnown RBP4.23□□□□□ -1.73
CLK1-203ENST00000409769 A0A1B0GUA9 196 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 KBTBD13C9JR72 458 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 K7ERI5 159 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 CETN3O15182 167 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 CLIC2O15247 247 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 TSPAN1O60635 241 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 PAGE4O60829 102 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SOCS5O75159 536 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 TOM1L1O75674 476 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 AKAP3O75969 853 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 FGFR1OPO95684 399 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 PMS2P2O95744 297 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 GNA14O95837 355 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 FTCDO95954 541 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 CHRNA1P02708 482 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 CLEC3BP05452 202 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 ADRB2P07550 413 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 LINC00271P0C7V0 271 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 TCEA1P23193 301 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 RRM1P23921 792 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 FASLGP48023 281 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 HARS2P49590 506 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 CRYBB1P53674 252 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 DLX5P56178 289 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 BRWD1-AS2P59051 145 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 MRPS6P82932 125 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 ENPEPQ07075 957 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SPAG1Q07617 926 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 ZNF155Q12901 538 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 SNTA1Q13424 505 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 NAE1Q13564 534 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 DRAP1Q14919 205 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms