RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CATP04040 527 aaKnown RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 UMPSP11172 480 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 PRPS2P11908 318 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 C6P13671 934 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 CD22P20273 847 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 PRKCQQ04759 706 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 PDGFRLQ15198 375 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 BCL7AQ4VC05 210 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 AGTRAPQ6RW13 159 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 KLHDC8AQ8IYD2 350 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 PAPD5Q8NDF8 572 aaKnown RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 NUS1Q96E22 293 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 TMED5Q9Y3A6 229 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 KANSL1LA0AUZ9 987 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 LILRB5O75023 590 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 CKMT2P17540 419 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 MAPK9P45984 424 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 IRF8Q02556 426 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 TRIM74Q86UV6 250 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 APIPQ96GX9 242 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 PPP1R16AQ96I34 528 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 ZNF583Q96ND8 569 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 OR52E6Q96RD3 313 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 THG1LQ9NWX6 298 aaKnown RBP19.55■□□□□ 0.72
USP39-204ENST00000409766 MAGEL2Q9UJ55 1249 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 PCDHGB4Q9UN71 923 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 PCDHGB5Q9Y5G0 923 aa19.55■□□□□ 0.72
USP39-204ENST00000409766 MMP20O60882 483 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 SLC16A8O95907 504 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 FASP25445 335 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 PBLDP30039 288 aaPredicted RBP19.54■□□□□ 0.72
USP39-204ENST00000409766 BDKRB1P46663 353 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ZNF33BQ06732 778 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 DPTQ07507 201 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 RNF220Q5VTB9 566 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 GLYATQ6IB77 296 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 TANGO2Q6ICL3 276 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 PPP4R4Q6NUP7 873 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ZBTB49Q6ZSB9 765 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 MSRB3Q8IXL7 192 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 FAM9CQ8IZT9 166 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 BIRC7Q96CA5 298 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 CNBD2Q96M20 576 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 PKP4Q99569 1192 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 SLC25A37Q9NYZ2 338 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 E7EQ34 232 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ACPPP15309 386 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 AMD1P17707 334 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 SDC1P18827 310 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 TACR1P25103 407 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 IMPA1P29218 277 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 OPRD1P41143 372 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 PHC1P78364 1004 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 PCDH1Q08174 1060 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 NAE1Q13564 534 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 XKR6Q5GH73 641 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ST13P4Q8IZP2 240 aaPredicted RBP19.54■□□□□ 0.72
USP39-204ENST00000409766 DTWD1Q8N5C7 304 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 OR56A3Q8NH54 315 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 WDR20Q8TBZ3 569 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 FOPNLQ96NB1 174 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 OR4K3Q96R72 315 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ZCCHC2Q9C0B9 1178 aaKnown RBP19.54■□□□□ 0.72
USP39-204ENST00000409766 OR2AG1Q9H205 316 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 ANAPC2Q9UJX6 822 aa19.54■□□□□ 0.72
USP39-204ENST00000409766 FAM149AA5PLN7 773 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 TBC1D3BA6NDS4 549 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 H3BM21 787 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 SOCS2O14508 198 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 TPST1O60507 370 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 PCSK2P16519 638 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 MAPK1P28482 360 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 GPR1P46091 355 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 DOC2AQ14183 400 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 GK3PQ14409 553 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 TMEM52BQ4KMG9 183 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 INTS11Q5TA45 600 aaKnown RBP19.53■□□□□ 0.72
USP39-204ENST00000409766 RAET1GQ6H3X3 334 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 VITQ6UXI7 678 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 ERN2Q76MJ5 926 aaKnown RBP19.53■□□□□ 0.72
USP39-204ENST00000409766 RNF175Q8N4F7 328 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 MED8Q96G25 268 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 CENPNQ96H22 339 aaPredicted RBP19.53■□□□□ 0.72
USP39-204ENST00000409766 OSBPL11Q9BXB4 747 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 IKZF5Q9H5V7 419 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 CIDEBQ9UHD4 219 aa19.53■□□□□ 0.72
USP39-204ENST00000409766 TRBV5-3A0A0A0MS03 114 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 ANTXRLA6NF34 631 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 LZTS3O60299 673 aaPredicted RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 FCGR1AP12314 374 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 PSMC3P17980 439 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 PBX2P40425 430 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 IL12RB1P42701 662 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 CCT8P50990 548 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 EPHX4Q8IUS5 362 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 MMAAQ8IVH4 418 aaKnown RBP19.52■□□□□ 0.72
USP39-204ENST00000409766 RIMKLAQ8IXN7 391 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 TESCQ96BS2 214 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 FCRL1Q96LA6 429 aa19.52■□□□□ 0.72
USP39-204ENST00000409766 NSMCE2Q96MF7 247 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms