RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SH2B3Q9UQQ2 575 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 DMTF1Q9Y222 760 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CCL27Q9Y4X3 112 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TOR1BO14657 336 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 LSM1O15116 133 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ULK1O75385 1050 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 DCNP07585 359 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ERGP11308 486 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 RABIFP47224 123 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SRP54P61011 504 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 IRF8Q02556 426 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TSTA3Q13630 321 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 HERC3Q15034 1050 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 NR6A1Q15406 480 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ALG11Q2TAA5 492 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 XKR6Q5GH73 641 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SUSD1Q6UWL2 747 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 GK5Q6ZS86 529 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CCL4L1Q8NHW4 92 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 MENTQ9BUN1 341 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SCHIP1Q9P0W5 487 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ZNF490Q9ULM2 529 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 INVSQ9Y283 1065 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 A0A1W2PPC4 97 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 PDZK1P1A8MUH7 402 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 PSMD12O00232 456 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 TNFRSF10CO14798 259 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 GYG2O15488 501 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 UGDHO60701 494 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 WFS1O76024 890 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 RASGRP1O95267 797 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 PDYNP01213 254 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 KRT6AP02538 564 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 KRT6BP04259 564 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 JUPP14923 745 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 GPX3P22352 226 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 AK4P27144 223 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 RPS9P46781 194 aaKnown RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 KRT6CP48668 564 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 DIO3P55073 304 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 NME5P56597 212 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 STX1BP61266 288 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 ERVK-8P63133 956 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 HMGCS1Q01581 520 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 DOC2AQ14183 400 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 ZRSR2Q15696 482 aaKnown RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 KIF19Q2TAC6 998 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 UAP1L1Q3KQV9 507 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 ATP6AP1LQ52LC2 224 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 C6orf136Q5SQH8 315 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 LIPJQ5W064 366 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 SPATA19Q7Z5L4 167 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 C2orf73Q8N5S3 287 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 DEFB119Q8N690 84 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 OR9I1Q8NGQ6 314 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 MTFMTQ96DP5 389 aaKnown RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 SLC45A3Q96JT2 553 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 SLC6A18Q96N87 628 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 FERD3LQ96RJ6 166 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 CCDC177Q9NQR7 707 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-203ENST00000409458 GPR27Q9NS67 375 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 AIG1Q9NVV5 245 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 GPRC5BQ9NZH0 403 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 SPATA7Q9P0W8 599 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 PLXND1Q9Y4D7 1925 aa13.62□□□□□ -0.23
GPNMB-203ENST00000409458 H0YHG0 523 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CLGNO14967 610 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 RGS14O43566 566 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 EML2O95834 649 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 THRAP10827 490 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 VARSP26640 1264 aaKnown RBP13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CPOXP36551 454 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 NUDT1P36639 197 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 NEK2P51955 445 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 MXRA7P84157 204 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CTBSQ01459 385 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 PCDH1Q08174 1060 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CUL3Q13618 768 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 CYLC2Q14093 348 aaPredicted RBP13.61□□□□□ -0.23
GPNMB-203ENST00000409458 AGKQ53H12 422 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 GRHL2Q6ISB3 625 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 TMPRSS11BQ86T26 416 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 LONP2Q86WA8 852 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 GJD3Q8N144 294 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 FNDC5Q8NAU1 212 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
GPNMB-203ENST00000409458 SELENOMQ8WWX9 145 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 MAGEB10Q96LZ2 347 aaPredicted RBP13.61□□□□□ -0.23
GPNMB-203ENST00000409458 ACPTQ9BZG2 426 aa13.61□□□□□ -0.23
GPNMB-203ENST00000409458 TMEM168Q9H0V1 697 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms