RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DSPP15924 2871 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 SRRM3A6NNA2 597 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 RRP8O43159 456 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 FKBP9O95302 570 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 SYF2O95926 243 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 MSL3P1P0C860 447 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 FGF5P12034 268 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 ZNF460Q14592 562 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 TRMT10CQ7L0Y3 403 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 BPHLQ86WA6 291 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 ZNF480Q8WV37 535 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 TCTN2Q96GX1 697 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 CHRNA10Q9GZZ6 450 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 KLHL25Q9H0H3 589 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 CAB39LQ9H9S4 337 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 FGF21Q9NSA1 209 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 LAMA5O15230 3695 aa19.15■□□□□ 0.66
PDLIM2-207ENST00000409417 A0A087WV48 116 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 A0A1W2PPV9 198 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 WISP3O95389 354 aaPredicted RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 FAM153BP0C7A2 387 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 STMN1P16949 149 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 OAS2P29728 719 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 PNLIPRP1P54315 467 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 FASTKQ14296 549 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 SF1Q15637 639 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 ZKSCAN8Q15776 578 aaPredicted RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 FAM153CQ494X1 144 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 ZFAND4Q86XD8 727 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 C19orf47Q8N9M1 422 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 OR8K5Q8NH50 307 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 KCNE4Q8WWG9 221 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 CCDC138Q96M89 665 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 RARRES3Q9UL19 164 aa19.14■□□□□ 0.65
PDLIM2-207ENST00000409417 E7ENX8 843 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 STMND1H3BQB6 276 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 TNFRSF8P28908 595 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 TAP2Q03519 686 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 ZIC1Q15915 447 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 PHKG1Q16816 387 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 PPP1R3BQ86XI6 285 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 SYTL1Q8IYJ3 562 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 OR2A1Q8NGT9 310 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 ANKRD49Q8WVL7 239 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 MRRFQ96E11 262 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 DCBLD2Q96PD2 775 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 FCRL4Q96PJ5 515 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 TXLNGYQ9BZA5 131 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 DPH1Q9BZG8 443 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 SPRY4Q9C004 299 aa19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-207ENST00000409417 A0A087WUV0 522 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 PHGDHO43175 533 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 SLU7O95391 586 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 ABHD2P08910 425 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 ENO2P09104 434 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 HIST1H2AGP0C0S8 130 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 HIST1H2ADP20671 130 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 MAGP20916 626 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 IMPA1P29218 277 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 DEKP35659 375 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 PMS2P54278 862 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 AP1S2P56377 157 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 RAB10P61026 200 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 GPR19Q15760 415 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 CDHR3Q6ZTQ4 885 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 DTX1Q86Y01 620 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 FAM20CQ8IXL6 584 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.12■□□□□ 0.654e-7■■■■■ 58.1
PDLIM2-207ENST00000409417 NAF1Q96HR8 494 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 HIST1H2AHQ96KK5 128 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 HIST1H2AJQ99878 128 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 H2AFJQ9BTM1 129 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 TRIM54Q9BYV2 358 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 ANKZF1Q9H8Y5 726 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 INTS7Q9NVH2 962 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 IKZF3Q9UKT9 509 aa19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 NOVA2Q9UNW9 492 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-207ENST00000409417 MYBL2P10244 700 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 LIPCP11150 499 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 PSMB5P28074 263 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 RPA3P35244 121 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 UAP1Q16222 522 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 KIAA1614Q5VZ46 1190 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 SUSD1Q6UWL2 747 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 SBSNQ6UWP8 590 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 LRRC69Q6ZNQ3 347 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 LRRC56Q8IYG6 542 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 OR2L3Q8NG85 312 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 SLC44A1Q8WWI5 657 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 ZUFSPQ96AP4 578 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 ZNF501Q96CX3 271 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 ULBP3Q9BZM4 244 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 DERL2Q9GZP9 239 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 FANCEQ9HB96 536 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 FAM60AQ9NP50 221 aa19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 STOX2Q9P2F5 926 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-207ENST00000409417 PILRAQ9UKJ1 303 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms