RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 HOXC11O43248 304 aaPredicted RBP8.86□□□□□ -0.99
LIG4-202ENST00000405925 ZNF217O75362 1048 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 ADSLP30566 484 aaPredicted RBP8.86□□□□□ -0.99
LIG4-202ENST00000405925 GPNMBQ14956 572 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 EID3Q8N140 333 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 OR9I1Q8NGQ6 314 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 CD200R1Q8TD46 325 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 DLG3Q92796 817 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 PRAP1Q96NZ9 151 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 LRMDAQ9H2I8 198 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 PRSS16Q9NQE7 514 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 MKS1Q9NXB0 559 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 BLOC1S6Q9UL45 172 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 ANGPT4Q9Y264 503 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 AP4S1Q9Y587 144 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 KIF13BQ9NQT8 1826 aa8.86□□□□□ -0.99
LIG4-202ENST00000405925 PSMG1O95456 288 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 EBLN1P0CF75 366 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 NT5EP21589 574 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC6A2P23975 617 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PEX19P40855 299 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CTSCP53634 463 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC16A1P53985 500 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 HSPB3Q12988 150 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC14A2Q15849 920 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PATL1Q86TB9 770 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 GKN2Q86XP6 184 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TMC8Q8IU68 726 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TMCO5AQ8N6Q1 288 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 ACVR1CQ8NER5 493 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 MIPOL1Q8TD10 442 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC13A3Q8WWT9 602 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 NCSTNQ92542 709 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PTCD3Q96EY7 689 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 C3orf14Q9HBI5 128 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 HRASLS2Q9NWW9 162 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PRRT4C9JH25 899 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 NDUFS4O43181 175 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PENKP01210 267 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 GBAP04062 536 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PPIBP23284 216 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 DNAJB13P59910 316 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 RAB8AP61006 207 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 HYAL1Q12794 435 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 HKDC1Q2TB90 917 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 UAP1L1Q3KQV9 507 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 REP15Q6BDI9 236 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 DENND1AQ8TEH3 1009 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 ARRDC3Q96B67 414 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TOE1Q96GM8 510 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC29A3Q9BZD2 475 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 KLHL4Q9C0H6 718 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 RNPEPL1Q9HAU8 725 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TAS2R1Q9NYW7 299 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 H2AFY2Q9P0M6 372 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 COPG1Q9Y678 874 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 A8MU76 341 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 MANBAO00462 879 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 OXTRP30559 389 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 MRPS21P82921 87 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 BNIP2Q12982 314 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 GNA13Q14344 377 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 UNC50Q53HI1 259 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 NUDT13Q86X67 352 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 ZDHHC13Q8IUH4 622 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 KIAA2013Q8IYS2 634 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PGAM4Q8N0Y7 254 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 ZNF786Q8N393 782 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 FAM156AQ8NDB6 213 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TTLQ8NG68 377 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 OR52B6Q8NGF0 335 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 GPR150Q8NGU9 434 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 FUBP1Q96AE4 644 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 SEMA3GQ9NS98 782 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CORO2BQ9UQ03 480 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 OARD1Q9Y530 152 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PCDHB11Q9Y5F2 797 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 ANKRD12Q6UB98 2062 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 DHRS12A0PJE2 317 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CLDN4O14493 209 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SLC28A2O43868 658 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 SERPINI2O75830 405 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 MPC1LP0DKB6 136 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CPN2P22792 545 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 CXCL12P48061 93 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TBPL1P62380 186 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 COL9A2Q14055 689 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 ELOCQ15369 112 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 TTC33Q6PID6 262 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 TMEM26Q6ZUK4 368 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 NET1Q7Z628 596 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 PHTF2Q8N3S3 785 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 OR2T34Q8NGX1 318 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 UTP15Q8TED0 518 aaKnown RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 ZNF382Q96SR6 550 aa8.85□□□□□ -0.99
LIG4-202ENST00000405925 PHF7Q9BWX1 381 aaPredicted RBP8.85□□□□□ -0.99
LIG4-202ENST00000405925 REEP1Q9H902 201 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms