RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CASTOR2A6NHX0 329 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 PRR32B1ATL7 298 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 PI4K2BG5E9Z4 385 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 PSMA7O14818 248 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 BUB3O43684 328 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 FCGR3BO75015 233 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 RLN1P04808 185 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 STAG3L1P0CL83 205 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 SAGP10523 405 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 CA4P22748 312 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 ATP5DP30049 168 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 NAGLUP54802 743 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 DLK1P80370 383 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 GCNT1Q02742 428 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 LGALS3BPQ08380 585 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 ARL16Q0P5N6 197 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 ILF3Q12906 894 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC158Q5M9N0 1113 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 GBP6Q6ZN66 633 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC91Q7Z6B0 441 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 NRARPQ7Z6K4 114 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF554Q86TJ5 538 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 DZIP1Q86YF9 867 aaKnown RBP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 LGI2Q8N0V4 545 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 KLHDC1Q8N7A1 406 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 DBF4BQ8NFT6 615 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 DMBX1Q8NFW5 382 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 OR4K1Q8NGD4 311 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 OR10Q1Q8NGQ4 319 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 HSD17B8Q92506 261 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 LMLNQ96KR4 655 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 PARK7Q99497 189 aaKnown RBP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 RHNO1Q9BSD3 238 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 C2orf40Q9H1Z8 148 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 SNX25Q9H3E2 840 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 BICC1Q9H694 974 aaKnown RBP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 LMAN1LQ9HAT1 526 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 TXNDC16Q9P2K2 825 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 TNFRSF18Q9Y5U5 241 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 IGSF1Q8N6C5 1336 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 SMIM30A4D0T7 59 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ANKRD61A6NGH8 418 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 C5orf52A6NGY3 159 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 PSMD14O00487 310 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 CIDEAO60543 219 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 TSHBP01222 138 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ATP1A1P05023 1023 aaKnown RBP3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 INHBAP08476 426 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ANKRD34CP0C6C1 535 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 IRF2P14316 349 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 DARSP14868 501 aaKnown RBP3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 EPCAMP16422 314 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 AMD1P17707 334 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC6A6P31641 620 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 RGS7P49802 495 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ERVFC1-1P60608 527 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 NPTX1Q15818 432 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 PTGISQ16647 500 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 UGCGQ16739 394 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ODF4Q2M2E3 257 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC25A53Q5H9E4 307 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 FAM76BQ5HYJ3 339 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 CYP4A22Q5TCH4 519 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 SUSD4Q5VX71 490 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC27A1Q6PCB7 646 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 BTNL8Q6UX41 500 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 PIGWQ7Z7B1 504 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 TMCO5AQ8N6Q1 288 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 FCAMRQ8WWV6 532 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 RAD54LQ92698 747 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 RIT1Q92963 219 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 PIGQQ9BRB3 760 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 UTP14AQ9BVJ6 771 aaKnown RBP3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 TLE6Q9H808 572 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 FKRPQ9H9S5 495 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 SDR39U1Q9NRG7 319 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZFP57Q9NU63 452 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ERAP1Q9NZ08 941 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 ITGA11Q9UKX5 1188 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 STUB1Q9UNE7 303 aa3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 HBS1LQ9Y450 684 aaKnown RBP3.58□□□□□ -1.84
HMGB1P17-201ENST00000403495 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 LOC101059948A0A1B0GTJ6 334 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 PRSS46E5RG02 174 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 ZNF197O14709 1029 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 FPGTO14772 594 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 CTDSPLO15194 276 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 SLC22A2O15244 555 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 FMO6PO60774 539 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 RPS6KA5O75582 802 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 GOSR1O95249 250 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 PGLSO95336 258 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 SIX3O95343 332 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 PLGP00747 810 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 NGFP01138 241 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 CRYAAP02489 173 aa3.57□□□□□ -1.84
HMGB1P17-201ENST00000403495 SERPING1P05155 500 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms