RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 OR1E2P47887 323 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CERS6Q6ZMG9 384 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 PEX13Q92968 403 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 RHBDF1Q96CC6 855 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CASD1Q96PB1 797 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ACPTQ9BZG2 426 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 H3BNC9 293 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 KDM1AO60341 852 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 OPRL1P41146 370 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 PREPP48147 710 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 EPHB3P54753 998 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 Q6ZVU0 165 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 NPAS4Q8IUM7 802 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 HJURPQ8NCD3 748 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 SH3KBP1Q96B97 665 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 KCNC2Q96PR1 638 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CORO1BQ9BR76 489 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 LHX3Q9UBR4 397 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ABCG2Q9UNQ0 655 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 CLIC1O00299 241 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 EPN2O95208 641 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 CRHBPP24387 322 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 ZFP36L2P47974 494 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 NCS1P62166 190 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 ADARB1P78563 741 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SYTL1Q8IYJ3 562 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 PIK3C3Q8NEB9 887 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 HTRA1Q92743 480 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 DACH2Q96NX9 599 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SLC52A3Q9NQ40 469 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 KRT84Q9NSB2 600 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 FAM155AB1AL88 458 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 BCAS1O75363 584 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 VIPP01282 170 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 IGLV3-27P01718 113 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 IL6P05231 212 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 TCEA2Q15560 299 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF829Q3KNS6 432 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 IER5LQ5T953 404 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 VRK3Q8IV63 474 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 RPL3LQ92901 407 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 REEP1Q9H902 201 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 EXOSC4Q9NPD3 245 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 TUBA8Q9NY65 449 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SNX6Q9UNH7 406 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SNX8Q9Y5X2 465 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 PIKFYVEQ9Y2I7 2098 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SDK1Q7Z5N4 2213 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 H0Y858 1186 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 NUDT7P0C024 238 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 OR56A5P0C7T3 313 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 HKDC1Q2TB90 917 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 USP39Q53GS9 565 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 ADNP2Q6IQ32 1131 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 CEP68Q76N32 757 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 PTRH1Q86Y79 214 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 NXPE1Q8N323 547 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF548Q8NEK5 533 aaPredicted RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 OR4K1Q8NGD4 311 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 DUS3LQ96G46 650 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 KLHL25Q9H0H3 589 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
PPP4R1-202ENST00000400555 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 TRBC1P01850 177 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CHRM5P08912 532 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 FUT4P22083 530 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 JAK1P23458 1154 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 HTR1BP28222 390 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PRIM2P49643 509 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 PHC1P78364 1004 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 MEF2AQ02078 507 aaPredicted RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 OR5AK3PQ8NH89 298 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 TSPEARQ8WU66 669 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC1A7O00341 560 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 MYO1DO94832 1006 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 SCELO95171 688 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CD160O95971 181 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 RPLP2P05387 115 aaKnown RBP12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 URODP06132 367 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CDH3P22223 829 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CCR7P32248 378 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 CLCN4P51793 760 aa12.33□□□□□ -0.44
PPP4R1-202ENST00000400555 SLC14A1Q13336 389 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms